Wednesday, January 15, 2020

LIVING MACHINES: FIRST SELF-HEALING ARTIFICIAL ORGANISM BUILT USING FROG STEM CELLS, HARDWARE

The bot furthers scientific understanding of the algorithms that define form and function in living beings.


JAN 15, 2020 10:52:17 IST

Scientists from the United States have succeeded in using living cells from frog embryos into other new life-forms, which they are referring to as a 'living, programmable organisms'.

The newly constructed self-healing creature is now known as and can approach towards targets. They may also help in carrying medicine inside a patient's body or conduct similar work. "These are novel living machines," says, a computer scientist and robotics expert at the University of Vermont who co-led the new research, also adding "They're neither a traditional robot nor a known species of animal. It's a new class of artefact: a living, programmable organism."

These creatures were designed on a supercomputer at UVM — and then assembled and tested by biologists at Tufts University.

Co-leader Michael Levin who directs the Center for Regenerative and Developmental Biology at Tufts says that they can search out compounds or radioactive contamination, can be used for gathering microplastic in the oceans, or for traveling in arteries to scrape out plaque.

The results of the new research were published on 13 January in the Proceedings of the National Academy of Sciences.

A 'Xenobot' living motor on the move. Image credit: PNAS US/Bongard et. al.

People have been manipulating organisms for human benefit since long and genetic editing is becoming widespread with time, and a few artificial organisms have been manually assembled in the past few years -- copying the body forms of known animals.

But this research, for the first time ever, "designs completely biological machines from the ground up," the team writes in their new study.

Many technologies are made of steel, concrete or plastic. That can make them strong or flexible. But they also can create ecological and human health problems, like the growing scourge of plastic pollution in the oceans and the toxicity of many synthetic materials and electronics.

"The downside of living tissue is that it's weak and it degrades," said Bongard. "That's why we use steel. But organisms have 4.5 billion years of practice at regenerating themselves and going on for decades."

And when they stop working — death — they usually fall apart harmlessly.

Both Levin and Bongard say the potential of what they have been learning about how cells communicate and connect extends deep into both computational science and our understanding of life.

"The big question in biology is to understand the algorithms that determine form and function," says Levin.

To make an organism develop and function, there is a lot of information sharing and cooperation — organic computation — going on in and between cells all the time, not just within neurons. These emergent and geometric properties are shaped by bioelectric, biochemical, and biomechanical processes, "that run on DNA-specified hardware," Levin says, "and these processes are reconfigurable, enabling novel living forms."

"As we've shown, these frog cells can be coaxed to make interesting living forms that are completely different from what their default anatomy would be," says Levin.

People worry about the implications of rapid technological change and complex biological manipulations. "That fear is not unreasonable," Levin says, adding, "When we start to mess around with complex systems that we don't understand, we're going to get unintended consequences."

A lot of complex systems, like an ant colony, begin with a simple unit — an ant — from which it would be impossible to predict the shape of their colony or how they can build bridges over water with their interlinked bodies.

"If humanity is going to survive into the future, we need to better understand how complex properties, somehow, emerge from simple rules," shared Levin.

Much of science is focused on "controlling the low-level rules. We also need to understand the high-level rules," he expressed.

"This study is a direct contribution to getting a handle on what people are afraid of, which is unintended consequences," Levin said.

Whether in the rapid arrival of self-driving cars, changing gene drives to wipe out whole lineages of viruses, or the many other complex and autonomous systems that will increasingly shape the human experience.


4

SCIENTISTS CREATE FIRST ‘LIVING ROBOTS’ IN MAJOR BREAKTHROUGH

'They're neither a traditional robot nor a known species of animal,' says creator. 'It's a new class of artifact: a living, programmable organism'


Andrew Griffin @_andrew_griffin

Scientists have created what they claim are the first ”living robots“: entirely new life-forms created out of living cells.

A team of researchers have taken cells from frog embryos and turned them into a machine that can be programmed to work as they wish.

It is the first time that humanity has been able to create “completely biological machines from the ground up”, the team behind the discovery write in a new paper.

That could allow them to dispatch the tiny “xenobots” to transport medicine around a patient’s body or clean up pollution from the oceans, for instance. They can also heal themselves if they are damaged, the scientists say.

“These are novel living machines,” says Joshua Bongard, the University of Vermont expert who co-led the new research. “They’re neither a traditional robot nor a known species of animal. It’s a new class of artifact: a living, programmable organism.”

The new creatures were designed using a supercomputer and then built by biologists. They could now be used for a variety of different purposes, those behind the creation say.


“We can imagine many useful applications of these living robots that other machines can’t do like searching out nasty compounds or radioactive contamination, gathering microplastic in the oceans, travelling in arteries to scrape out plaque,” said co-leader Michael Levin who directs the Center for Regenerative and Developmental Biology at Tufts University, where the xenobots were actually created.

The team described the major breakthrough in a paper published in the Proceedings of the National Academy of Sciences.

Humanity has been changing the way organisms work in some form for perhaps as long as it has been around. In recent years, there have been major leaps forward in that discipline, with genetic editing and the creation of artificial organisms.

But the researchers say that their work is the first time that a completely biological machine has been entirely designed and created by researchers.

They started to do so by using a supercomputer to create thousands of possible designs for the new life-forms. It did so through a virtual version of evolution, with scientists setting the computer a task and it calculating what design might work best.

If it was asked to create a being that moved in a certain direction, for instance, it would try out hundreds of different possible ways to combine simulated cells into different shapes that would allow the life-form to do so. It worked using rules about what the simple cells that would serve as the materials could do, and at the end gave scientists theoretical designs for the life-forms.

The second part of the research then saw a microsurgeon and other researchers turn those designs into real life. They took stem cells from the embryos of African frogs, incubated them, and then used incredibly tiny tools to cut them apart and assemble them into the design that the computer had created.

That meant that scientists had stuck real organic material together to create a life-form that had never been seen before in nature.


After that happened, the cells started to work together. Just as the computer had suggested, the robots were able to move on their own, eventually doing so in a coherent fashion and exploring their environment over a matter of weeks.

They were able to work to push pellets around, organising themselves spontaneously and collectively, according to the researchers.

And scientists think they will be able to create even more complex versions of the xenobots. Computer simulations suggest that it should be possible to design the xenobots with a pouch on their body that could be used to carry an object – delivering a drug by swimming through the body, for instance.


Designing robots out of such living materials could lead to vast changes in the way that technology is used, the scientists suggest. The xenobots can regenerate, and are entirely biodegradable when they die.

What’s more, they are able to repair themselves. Unlike traditional materials, the robots can be sliced almost in half and will fix themselves back together again, they claim.

The researchers admit that there is the danger that such developments could be harnessed in ways that we don’t even understand, leading to unintended consequences. If the systems become sufficiently complex, it might be impossible for humans to predict how they will start to behave.

“If humanity is going to survive into the future, we need to better understand how complex properties, somehow, emerge from simple rules,” said Mr Levin n a statement. “This study is a direct contribution to getting a handle on what people are afraid of, which is unintended consequences,” he said.

He said that the new study is an important step towards understanding such systems. By learning more about how living systems decide how they will behave, and whether and how that might be changed, we will be able to better understand their outcomes

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