Thursday, January 05, 2023

From the road to the plate: lettuce takes up toxic additives from tyre wear

Chemicals from tyre wear could get into our vegetables via sewage sludge and waste water

Peer-Reviewed Publication

UNIVERSITY OF VIENNA


Lettuce plants take up chemicals that are released by tyre abrasion: The picture shows the actual experimental setup in which the researchers added tyre abrasion to the nutrient solutions of lettuce plants. 

IMAGE: LETTUCE PLANTS TAKE UP CHEMICALS THAT ARE RELEASED BY TYRE ABRASION: THE PICTURE SHOWS THE ACTUAL EXPERIMENTAL SETUP IN WHICH THE RESEARCHERS ADDED TYRE ABRASION TO THE NUTRIENT SOLUTIONS OF LETTUCE PLANTS. view more 

CREDIT: GABRIEL SIGMUND

Wind, sewage sludge, and waste water carry tyre wear particles from roads onto farmland. A new lab study shows: The pollutants contained in the particles could get into the vegetables grown there. Researchers at the Centre for Microbiology and Environmental Systems Science (CMESS) at the University of Vienna have investigated whether chemicals released from tyres find their way into lettuce plants and could ultimately end up on our plates. Their analyses showed: The lettuce took up all the compounds studied - some of them highly toxic. Further investigations are to show how this process actually takes place in arable soils. The study has now been published in the international journal Environmental Science & Technology.

Driving a car produces tyre wear particles, which are blown into the environment by the wind and washed into rivers and sewage by the rain – in total around 1 kg per citizen per year. Through the atmosphere and with the waste water or the sewage sludge used as fertilizer in agriculture, the tyre particles can reach agricultural soils. There, potentially harmful chemicals might be released from the tyre into the environment: Tyre wear particles and other types of microplastics contain additives, which ensure specific properties, consistencies and the durability of these plastics. In soils, the small plastic or tyre particles usually release their pollutants in the upper soil layers – this was determined in earlier studies by the research team led by environmental geoscientist Thilo Hofmann from the University of Vienna. In their current study, the researchers shed light on whether the pollutants could migrate from there into the crops. 

Lettuce plants continuously take up toxic compounds from tyre wear particles

"Tyre wear particles contain a number of organic chemicals, some of which are highly toxic," says Anya Sherman, PhD student at the Centre for Microbiology and Environmental Systems Science (CMESS) and co-first author of the newly published study. Thilo Hofmann, head of the research group, adds: "If these chemicals are released in the root zone of edible plants, they can be a health concern for consumers – provided the chemicals are taken up by the plants." This is exactly the question the research team addressed in several experiments. The environmental geoscientists added five chemicals to the hydroponic solutions of lettuce plants. Four of these chemicals are used in tyre production. Not all of them have already been confirmed to be harmful. Yet, the fifth chemical is a transformation product of one of these four, created once the tyres are in use, and it is proven to be toxic: The chemical 6PPD-quinone (originating from 6PPD) has been linked to mass deaths of salmon in the U.S. "Our measurements showed that the lettuce plants took up all the compounds we investigated through their roots, translocated them into the lettuce leaves and accumulated them there," Sherman reports. This was also evident when the lettuce plants were not exposed to the chemicals directly, but indirectly via tyre crumb. "The lettuce plants continuously take up the potentially harmful chemicals that are released from the tyre abrasion particles over the long term," reports Thilo Hofmann.

Lettuce produces metabolites with as of yet unassessed toxicity

Using high resolution mass spectrometry methods, the Viennese environmental geoscientists not only measured the extent to which the previously defined chemicals ended up in the lettuce plants. They also identified the substances to which the lettuce plants metabolised the chemicals. "The plants processed the substances and in doing so they produced compounds that have not been described before. Since we don't know the toxicity of these metabolites, they pose a health risk that cannot be assessed so far," Thorsten Hüffer, senior scientist at CMESS, emphasises. The metabolites identified by the research team are quite stable in the plant. Most likely, they would therefore be preserved until reaching our plates. "In the human body, however, such compounds are very easily broken down. Thus, if someone eats such a contaminated lettuce, the original chemicals could be released again in the body," Sherman explains.

Next step: Analysis of the described processes in soil systems and detection in environmental water 

In further studies, the Viennese research team plans to better trace the possible path of tyre-wear pollutants from the road to the plate. "The processes we have investigated probably take place differently in soil systems. In a next step, we are therefore looking at the possible uptake of tyre additives by plant roots in natural soils," reports co-author Ruoting Peng, who, in her dissertation project, traces the presence of an even wider range of additives in the environment, focusing on the pollution of water bodies. To better understand how such chemicals are entering the environment, in an ongoing project the research team is looking to obtain data on the concentration of these chemicals along the Danube in cooperation with the CleanDanube Project. 

Microplastics in the environment: a long-term source of pollution

There, the researchers' interest revolves equally around the release mechanisms, the quantities and the long-term behaviour of the pollutants. For a recent study also published in Environmental Science & Technology, the Environmental Geosciences team analysed for how long microplastics release pollutants into the aquatic environment. In particular, they focused on phthalates – additives used primarily in the production of PVC to provide flexibility and stability. "These plasticisers have already been detected everywhere in the environment. Yet, little is known about their release process from the microplastics and how environmental conditions can influence the release," explains the first author of this study, Charlotte Henkel. "Our analyses have shown that the PVC microplastics studied can release phthalates into aquatic systems – for example rivers, lakes or groundwater – over more than 500 years." The extent to which this happens always depends on the environmental conditions. Nevertheless, according to Thilo Hofmann, the study clearly shows: "Once microplastics have reached the aquatic environment, they remain a source of potentially polluting substances, and in the case of phthalates, for a very long time."




In a further step, the Viennese environmental geoscientists will investigate whether and how lettuce plants take up the chemicals released by tyre abrasion in soil systems.

Algal Purposeful Foods and Nutraceutical

Aids, Prospects, and Experiments

Book Announcement

BENTHAM SCIENCE PUBLISHERS

Edible algae, including seaweeds, are a source of functional food, dietary supplements, metabolites and bioactive compounds. Algal-based functional foods have potential health benefits, and their commercial value depends on their applications in the food and nutraceutical industries. The book “Algal Functional Foods and Nutraceutical“ covers several aspects of algal-based functional foods. It informs the reader about algal cultivation techniques, environmental impact, habitat, nutraceutical potential, extraction of bioactive metabolites, functional-food composition, bio-prospection, culture-induced nutraceutical compounds, algae-based bio-packaging, algal-biorefinery, toxicity, trends and future prospects. The editors present the topics in a research-oriented format while citing scholarly references. This book is a comprehensive resource for anyone interested in the nutritional benefits and industrial utilization of algae as a sustainable food source.

 

About the editor:

Dr. Avinash Mishra is a Principal Scientist at CSIR-Central Salt and Marine Chemicals Research Institute (CSIR-CSMCRI), Bhavnagar, India. He is a graduate from Ewing Christian College, Allahabad (an autonomous college of Allahabad University). He did his Masters and PhD in Molecular Biology and Biotechnology from GB Pant University of Agriculture and Technology, Pantnagar (first Agriculture University of India). His research area is Seaweed Metabolomics & Biotechnology, Plant Molecular Biology, Abiotic Stress Tolerance of Plants, and Plant Transgene Technology. He has published over 100 research articles in the journals of international repute with 43 h-index, so far (as per Google Scholar). Moreover, he has handled more than 10 research grants (projects) and also published about 20 book-chapters with international publishers. He has guided more than 15 PhD students (3 are currently working). He also mentored more than 15 graduate students for their dissertation or research internship. He has several years of editorial experience in several international scientific journals. Currently, he is serving as Associate Editor for the section Marine Biotechnology of Frontiers in Marine Science, and Guest Editor for Foods. He has been honored with Young Scientist Award from Council of Science and Technology (UP-CST), Govt. of UP and Council of Scientific and Industrial Research (CSIR), Govt. of India for excellent contribution in the field of Biological Sciences (Abiotic Stress Tolerance).

 

Keywords:

Marine algae, Micro algae, Seaweed, Bioactive compound, Edible Seaweed, Vegan protein, Functional Food, Human health, Nutraceuticals, Metabolomics, Algal Food, Dietary supplement, Phycology, Probiotics, Food Science,  Phyco-nutraceutical, Nutrition, Food quality, Marine biology, Algal cultivation

 

For more information please visit: http://bit.ly/3UhVBYr

Rolling in benefits: New method for effective compression of plant biomass for alternate fuel and anti-viral applications

Researchers from Okayama University have developed a novel mechanical compression method to squeeze maximum benefits from plant biomass

Peer-Reviewed Publication

OKAYAMA UNIVERSITY

Novel mechanical compression method by Okayama University researchers dehydrates plant biomass for power generation without thermal drying 

IMAGE: THIS PROCESS OF COMPRESSING WOODY AND HERBACEOUS BIOMASS GENERATES PELLETS WITH GOOD COMBUSTION PERFORMANCE AND SQUEEZED LIQUID EXTRACTS WITH WATER-SOLUBLE LIGNIN THAT SHOWS SUPERIOR ANTIVIRAL PROPERTIES view more 

CREDIT: TOSHIAKI OHARA FROM OKAYAMA UNIVERSITY

The steady rise in global energy consumption is causing a rapid depletion of fossil fuel resources. Since fossil fuels take thousands of years to replenish, there is an urgent need to determine alternate renewable energy sources. Biomass is a reliable renewable source of energy since it comprises organic matter from plants and animals. Biomass is readily available in nature and its organic composition makes it a top choice for an environment-friendly energy resource. However, plant biomass contains more than 50% moisture, which needs to be reduced by mechanical methods or through heating and natural seasoning to about 35% for increasing the power generation efficiency when used as fuel. For optimal benefits, this drying process should be fast, economic, and energy efficient. The current system of mechanical compression is inefficient as it needs a subsequent thermal drying process, which makes the operation energy- and time-consuming and may often involve cumbersome equipment of appreciable cost. Moreover, the squeezed liquid produced as a by-product by most of these methods does not contain water-soluble lignin—an important structural polymer in plant cells with myriads of applications.

 

To address these issues, researchers from Japan led by Dr. Toshiaki Ohara, an Assistant Professor in the Department of Pathology and Experimental Medicine, Faculty of Medicine, Dentistry and Pharmaceutical Sciences, Okayama University have identified an effective mechanical compression system for drying plant biomass for power generation without the need for thermal drying. Their novel method can be applied on both woody and herbaceous plants and generates a compression liquid with water-soluble lignin that has basic antiviral properties against influenza and pig epidemic diarrhea viruses.

 

In their study, the findings of which were published on 22 October 2022 in the Journal of Material Cycles and Waste Managementthe researchers used cedar wood board and chips as woody biomass and the ginger herb species Alpinia zerumbet as herbaceous biomass to test the novel mechanical rolling compression method. They found that cedar board and  Alpinia zerumbet were compressed more effectively than cedar chips. Explaining this observation, Dr. Ohara says, “Using our technique, all plants could be compressed; however, cedar board and Alpinia zerumbet were more effectively compressed than cedar chips, which were compressed in a random direction. This indicates that compression along plant vessels, such as straw, is essential for efficacy.” Here, it must be mentioned that plant vessels are tissues in vascular plants associated with the conduction of nutrients and water.

 

After compression, the researchers crushed and pelletized the residues to determine their combustion performance, an indicator of their potential as biomass for power generation. The liquid obtained as a byproduct of compression was filtered, its lignin content and structure determined, and its antiviral properties evaluated using cell viability assays.

 

The cedar board pellets showed a higher heat value on combustion, which matched the ISO standards, attesting to their higher energy performance. The ginger herb species yielded more water-soluble lignin, but its heat value on combustion was slightly lower, at 95% of the ISO standards. However, both cedar board and Alpinia zerumbet compression liquids significantly inhibited influenza and porcine epidemic diarrhea virus infection.  

 

Dr. Yuta Nishina from the Research Core for Interdisciplinary Sciences, Okayama University, a co-author of the study, observes, “The non-chemically extracted water soluble lignin obtained by this method can find applications in the fields of medicine, cosmetics, and livestock husbandry.” Besides, the high-carbon content water-soluble lignin may find use in carbon nanomaterial production and contribute to reducing carbon-driven pollution.

 

Summarizing the benefits of their novel technique, Dr. Ohara observes, “Our method does not require time, a stockyard, or additional thermal drying, allowing for on-site operation. This compressor can squeeze both wood and herbs allowing us to promote biomass electric power generation using locally grown plants. These characteristics are beneficial for advancing local sustainability.”

 

Here’s hoping their technique continues to roll in benefits for a greener tomorrow!

 

About Okayama University, Japan

As one of the leading universities in Japan, Okayama University aims to create and establish a new paradigm for the sustainable development of the world. Okayama University offers a wide range of academic fields, which become the basis of the integrated graduate schools. This not only allows us to conduct the most advanced and up-to-date research, but also provides an enriching educational experience.

Website: https://www.okayama-u.ac.jp/index_e.html

 

About Assistant Professor Toshiaki Ohara from Okayama University, Japan

Dr. Toshiaki Ohara holds a degree as Doctor of Medicine. He is currently working as an Assistant Professor at the Department of Pathology and Experimental Medicine, at Okayama University in Japan. He has about 110 publications and has a special interest in areas like cancer biology, animal models, flow cytometry, and surgery.

 

Tweets, news offer insights on invasive insect spread

Peer-Reviewed Publication

NORTH CAROLINA STATE UNIVERSITY

A new North Carolina State University study shows the potential for using Twitter and online news articles to track the timing and location of invasive insect spread in the United States and around the globe. Researchers say these sources are promising for filling in gaps when official data are not widely available.

“The idea was to explore if we could use this data to fill in some of the information gaps about pest spread, and ultimately, to support the development of better predictive models of where pest spread is happening, and when to use costly control measures,” said Laura Tateosian, associate teaching professor in the NC State Center for Geospatial Analytics. “Even though these are not formal scientific sources, we found that we could clearly see some of the major events that were occurring about two invasive pests in the news, and on Twitter.”

In the study, the researchers tracked past Tweets about two insects – spotted lanternfly and Tuta absoluta – compiled by a Web-based subscription service, Brandwatch, as well as online news articles aggregated by Google News and GDELT, or the Global Database of Events, Language and Tone Project.

Spotted lanternfly, which was first reported in the United States in Pennsylvania in 2014, is an insect native to Asia that can damage or destroy grapes, cherries, hops, certain lumber trees and other plants. The research team tracked historical posts about spotted lanternfly in Pennsylvania in a single year in 2017, and then globally between 2011 and 2021.

Tuta absoluta, an insect also known as the tomato leaf miner, is native to South America. It was discovered in Spain in 2006, and has spread into parts of Europe, Africa, Asia and the Middle East. It has been nicknamed the “tomato Ebola” because of the devastation it can cause to tomato crops. The researchers tracked posts about Tuta absoluta between 2011 and 2021.

“While some invasive insects have reached their global range, in both of these cases, the pests are actively spreading,” said Ariel Saffer, graduate student in geospatial analytics at NC State. “We launched this as a proof-of-concept study to see if it would be scientifically reasonable to use these sources to track pest spread. We compared information in places where the insects were known to be present to see if these sources accurately captured existing knowledge.”

The researchers found that activity on Twitter and in news stories tracked some of the patterns in official surveys. For example, the volume of Twitter posts and news activity about spotted lanternfly tracked the seasonal pest cycle, with more activity in the summer and fall. In terms of location, they saw a high volume of Tweets and news articles in areas located at the epicenter of outbreaks. In Pennsylvania, news articles captured a subset of counties confirmed in 2017 by USDA Animal and Plant Health Inspection Service survey data, but also uncovered one county not listed in official records.

For Tuta absoluta, the team found posts on Twitter and in news stories often coincided with global pest spread, as compared to reports gathered by the European and Mediterranean Plant Protection Organization (EPPO). Information in news and Twitter posts also aligned with survey data for this pest in Nigeria, and sometimes before that information was widely available in scientific sources.

The researchers say the findings suggest Twitter and news information could be useful to supplement official data sources, but more work is needed.

“News media and social media have the potential to give you more immediate insight into what’s going on, especially if scientific information on insect spread is not immediately published in scientific literature, or not widely available to other scientists,” Saffer said. “Also, relying on data from scientific publications can sometimes offer a patchwork coverage of space and time, depending on when that study happened. It can be hard to get aggregated information in continuous time, especially at the global scale, as that information can be managed by multiple agencies.”

The study, “Plant pest invasions, as seen through news and social media,” appears online in Computers, Environment and Urban Systems. Co-authors included Chelsey Walden-Schreiner and Makiko Shukunobe.

-oleniacz-

Note to Editors: The study abstract follows.

Plant pest invasions, as seen through news and social media

Authors: Laura G. Tateosian, Ariel Saffer, Chelsey Walden-Schreiner, Makiko Shukunobe

PublishedComputers, Environment and Urban Systems

DOI: 10.1016/j.compenvurbsys.2022.101922

Abstract: Invasion by exotic pests into new geographic areas can cause major disturbances in forest and agricultural systems. Early response can greatly improve containment efforts, underscoring the importance of collecting up-to-date information about the locations where pest species are being observed. However, existing invasive species databases have limitations in both extent and rapidity. The spatial extent is limited by costs and there are delays between species establishment, official recording, and consolidation. Local online news outlets have the potential to provide supplemental spatial coverage worldwide and social media has the potential to provide direct observations and denser historical data for modeling. Gathering data from these online sources presents its own challenges and their potential contribution to historical tracking of pest invasions has not previously been tested. To this end, we examine the practical considerations for using three online aggregators, the Global Database of Events, Language and Tone (GDELT), Google News, and a commercial media listening platform, Brandwatch, to support pest biosurveillance. Using these tools, we investigate the presence and nature of cogent mentions of invasive species in these sources by conducting case studies of online news and Twitter excerpts regarding two invasive plant pests, Spotted Lanternfly and Tuta absoluta. Our results using past data demonstrate that online news and social media may provide valuable data streams to supplement official sources describing pest invasions.

Climate risk insurance can effectively mitigate economic losses

Peer-Reviewed Publication

POTSDAM INSTITUTE FOR CLIMATE IMPACT RESEARCH (PIK)

In the US, hurricanes caused more than $400 billion in direct economic losses over the historical period 1980–2014, with losses peaking at more than $150 billion in 2005, the year when hurricane Katrina made landfall. "After intense storms with high direct economic losses, the economy may need several years to recover, such that a complete recovery may not always be possible between subsequent intense storms. Our model accounts for these long-term effects of tropical cyclones on economic development that can be much larger than the immediate effects," explains Christian Otto, scientist at the Potsdam Institute for Climate Impact Research (PIK) and one of the lead authors of the study, which will be published in the renowned scientific journal Science Advances.

Economic growth losses from hurricanes could more than double in the US

"There is good scientific agreement that with ongoing global warming, the proportion of the most intense hurricanes will increase. Our computer simulations show that hurricane-induced economic growth losses could more than double in the US compared to the historical period even if global warming can be limited to below 2° Celsius in accordance with the Paris Climate Agreement. Without stringent reductions of greenhouse gas emissions, this warming level could be reached as early as in the middle of this century," emphasizes PIK-scientist Kilian Kuhla, the other lead author of the study.

In their study, the authors also assess the effectiveness and limitations of insurance as an adaptation strategy: "Our results show that a comprehensive, tax-financed climate risk insurance accelerates economic recovery, and is thus an effective tool to mitigate climate-change induced increases in economic losses. In the US, the implementation of such an insurance scheme could compensate for the expected increase in hurricane-induced growth losses, at least if global warming can be limited to 2° Celsius," explains co-author Tobias Geiger, scientist at the the German Weather Service and PIK.

This finding could also stimulate the ongoing discussion in Germany on whether natural hazards insurance should become mandatory to counteract the intensification of extreme weather events under global warming.

National insurance mechanisms insufficient in strongly affected developing countries

However, the study also finds that already in the present climate, national insurance solutions may be insufficient to effectively mitigate the economic losses caused by extreme weather events in strongly affected developing countries. For Haiti, as an example of a small island developing state strongly affected by hurricanes, the study shows that even if climate risk insurance were as well developed as in the US, growth losses would still be six times higher. "Our findings demonstrate the importance of international climate finance to help strongly affected developing countries to cope with climate change impacts. Further, climate risk insurance should be complemented by a broad portfolio of other adaptation measures such as investments in better building standards and resilient infrastructure," explains Christian Otto.

The authors stress that in addition to climate adaptation, a rapid and massive reduction of greenhouse gas emissions is key to mitigate climate change-induced losses in the long-run: "Current climate protection policies are insufficient to meet the agreed ‘well below 2°C’ warming limit but may rather lead to 2.7°C of warming. In consequence, US growth losses could more than double compared to a Paris-compatible 2°C scenario and increase more than sixfold compared to the historical period," says Katja Frieler, head of the research department Transformation Pathways at PIK and co-author of the study.

 

Article: Christian Otto, Kilian Kuhla, Tobias Geiger, Jacob Schewe, Katja Frieler (2023): Better insurance could effectively mitigate the increase in economic growth losses from US hurricanes under global warming. Science Advances. [DOI: 10.1126/sciadv.add6616]

Weblink to the article once it is published: http://www.science.org/doi/10.1126/sciadv.add6616

After hurricanes, Florida neighborhoods see steady housing demand, wealthier residents

A new peer-reviewed study finds that, between 2000 and 2016, communities hit by hurricanes see no long-term change in housing demand—but that wealthier residents move in in the years immediately following a storm

Peer-Reviewed Publication

RESOURCES FOR THE FUTURE (RFF)

A new peer-reviewed study, which analyzes Florida housing markets battered by hurricanes, finds that affected areas tend to gentrify slightly in the years following a storm: the average income of new buyers increases while long-term demand stays stable.

The authors of the paper—who are based at Resources for the Future (RFF), the University of California San Diego, and the US Government Accountability Office—use data from county tax assessments, the National Oceanic and Atmospheric Administration (NOAA), and Zillow to gauge conditions of the housing markets and population turnover in Florida from 2000 to 2016.

The finding that housing demand didn’t decrease—and, perhaps counterintuitively, attracted wealthier inhabitants—was particularly surprising to the authors, especially given Florida’s reckoning with hurricane adaptation and resilience measures in the face of climate change.

“Hurricanes are projected to get stronger,” coauthor and RFF Fellow Yanjun (Penny) Liao said. “Our findings show that the idea that people will naturally retreat from hazardous areas may not necessarily hold up. In Florida, at least, it appears that market forces are not encouraging people to move to safer places.”

The authors find that hurricanes cause a temporary increase in home prices, likely due to the sudden decrease in housing supply from storm losses. However, they find that prices subside to baseline levels after an average of three years, which is approximately how long it takes for areas to build up housing stock to pre-storm levels. But during those pivotal three years when housing prices are higher than normal, the authors note several important tendencies:

  • In the three years following a hurricane, the average income of new buyers increases proportionally to the rise in home prices. By the time prices stabilize, more than a quarter of all homes are occupied by households with a higher income than before the hurricane arrived.
  • Home prices in hurricane-ravaged areas are 5 percent higher on average than unaffected ones during the three years following a hurricane. After three years, prices return to—but do not drop below—pre-storm levels.
  • There is no significant change to the socio-demographic characteristics of neighborhoods after a hurricane other than income.
  • Hurricanes do not fundamentally change the long-run demand for housing in affected areas.

One hypothesis for the gentrification phenomena is that wealthier households may move into communities at a higher rate following a storm because they have a greater ability to both absorb the temporary price increase and any insurance cost increases.

"In some ways, this indicates a market flaw given the current state of the climate,” said coauthor Joshua Graff Zivin of the University of California San Diego. “Policies may be needed to ensure that these communities have strong adaptation and mitigation measures in place to deal with future storms.”

The findings in this study are something that the National Flood Insurance Program (NFIP) and federal disaster assistance programs could find useful. Gentrification in Florida could lead to higher post-hurricane insurance claims from the NFIP, which could place a heavier burden on federal taxpayers, who back the program. In addition, federal spending in disaster assistance could also increase as a result.

The authors note that future research should examine the equity implications of post-hurricane housing markets, particularly in the context of fluctuating housing prices and options available to lower income buyers and renters in the years following a hurricane.

For more, read the Journal of Environmental Economics and Management article, “How Hurricanes Sweep Up Housing Markets: Evidence from Florida,” by Joshua Graff Zivin of the University of California San Diego, Yanjun (Penny) Liao of Resources for the Future, and Yann Panassié of the US Government Accountability Office.

Researchers detect fluoride in water with new simple color change test

Test is first to use artificial cell sensors to detect environmental contaminant

Peer-Reviewed Publication

NORTHWESTERN UNIVERSITY

Cell-free biosensors 

IMAGE: DIAGRAM OF CELL-FREE BIOSENSOR view more 

CREDIT: LUCKS/KAMAT; NORTHWESTERN UNIVERSITY

Environmental contaminants like fluoride, lead and pesticides exist all around and even within us. While researchers have simple ways to measure concentrations of such contaminants inside lab environments, levels are much more difficult to test in the field. That’s because they require costly specialized equipment.

Recent efforts in synthetic biology have leveraged cellular biosensors to both detect and report environmental contaminants in a cost-effective and field-deployable manner. Even as progress is being made, scientists have struggled to answer the question of how to protect sensor components from substances that naturally exist in extracted samples.

A cross-disciplinary team of synthetic biologists at Northwestern University is developing a sensor platform that will be able to detect a range of environmental and biological targets in real-world samples. Using an established riboswitch to build a biosensor for fluoride, the team found they could both protect the sensor and operate similarly to the way cells do by encapsulating the sensor inside a fatty membrane.

In a new paper published today (Jan. 4) in the journal Science Advances, researchers demonstrated that by modifying the makeup and penetrability of the lipid bilayer membrane, they could further tune and control the performance of their sensor.

“So much data is being generated, and a lot of it is being driven by health apps like smart watches,” said Julius Lucks, a co-corresponding author and professor of chemical and biological engineering at Northwestern’s McCormick School of Engineering. “We can sense our heartbeat, our temperature, but if you think about it, we really have no way to sense chemical things. We’re living in an information age, but the information we have is so miniscule — chemical sensing opens enormous dimensions of information that you can tap into.”

Lucks is also the associate chair of the chemical and biological engineering department. His lab has advanced the field’s understanding of molecular systems that respond to environmental changes by studying RNA and its role in cells; how RNA is used by cells to sense changes in their environment; and how these concepts can be used within cell-free systems to monitor the environment for health and sustainability.  

Cell-free synthetic biology, in which engineered biomolecular systems are used to activate biological machinery rather than living cells, is compelling because it is efficient, versatile and low-cost. Lucks designed a riboswitch sensor using bacterial cell extracts to power gene expression reactions (including fluorescent RNA or protein that lights up in response to contaminants) that produce visual outputs cheaply and within minutes.

Neha Kamat, an assistant professor of biomedical engineering within McCormick and a co-corresponding author, originally met Lucks at their faculty orientation and was interested in his desire to expand access to information. Kamat, whose expertise is in engineered membranes and membrane assembly, wondered if she could make Lucks’s test tube system better using a vesicle, a membrane with two layers.  

“They’re using RNA and its associated machinery to sense molecules in real water samples and generate meaningful outputs,” Kamat said. “My lab works a lot with the lipids commonly used to encapsulate mRNA for drug delivery, with the goal of using these compartments to build more cell-like structures. We had the idea that we could protect Julius’s switches and allow them to work in samples that might be kind of dirty with other contaminants, like a cell can.”

Other researchers have tried to place a sensor inside a membrane, but the switch stopped working properly and produced a much smaller signal because it’s difficult to fit everything within the small container and then scale it up. To overcome this, the team modified the genetic output in the sensor to amplify and color it, so it’s visible by eye and “you don’t need a fancy detector to do it,” said Lucks.

Encapsulation and protection are important to the sensor to make it function in native environments, like a wastewater channel with lots of other contaminants to erode the switch. This would be an example of “distributed sensing,” which could aid in fields from agriculture to human health.

The group came together more officially when they received Northwestern’s Chemistry of Life Processes Institute’s (CLP) Cornew Innovation Award by pitching their “potentially disruptive” idea to the CLP’s advisory board. The team earned seed funding to get their idea off the ground.

Lucks calls this project a “jumping off point” from which they will be able to embed sensors into more materials, including “smart” materials that can change properties, as in biology.

“As synthetic biologists, one of our major themes is identifying challenges and looking to nature,” Lucks said. “What is it doing already? Can we build off that and make it do more to meet our needs?”

Fluoride became an obvious choice because there’s a natural RNA molecule that senses it, allowing the team to design a simpler mechanism. But in the future, Kamat and Lucks have high ambitions about where use of the sensors can expand.

For example, the sensors could flow through the human body to detect small molecules and biomarkers before the sensor is retrieved through urine or another passive method. It could also detect levels of nitrate in soil and aid in monitoring run-off. Beyond that, Lucks and Kamat are excited to see uses within materials science such as soft robotics, thinking about how to build something akin to a butterfly that smells through its feet.

The paper, “Robust and tunable performance of a cell-free biosensor encapsulated in lipid vesicles,” was supported by the CLP, the National Science Foundation (grant numbers 1844219, 1844336 and 2145050) and the U.S. Department of Defense National Science and Engineering Graduate Fellowship. Margrethe A. Boyd and Walter Thavarajah (of Northwestern) were also co-authors on the study.

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