Friday, May 09, 2025

 

New ancient fish species earliest known salmon ancestor




University of Alaska Fairbanks
Excavation on Colville River 

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Scientists excavate at the site on the Colville River where many of the fish fossils were found.

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Credit: UAF photo by Kevin May





The Arctic landscape during the Cretaceous Period may have been dominated by the dinosaurs, but the rivers and streams held something more familiar.

Alaska’s fresh waters 73 million years ago were teeming with the ancient relatives of today’s salmon, pike and other northern fish. A new paper published this week in the journal Papers in Palaeontology has named three new species of fish from that time period, including a salmonid, dubbed Sivulliusalmo alaskensis.

“This is not only a new species; it’s the oldest salmonid in the fossil record,” said Patrick Druckenmiller, director of the University of Alaska Museum of the North and the paper’s senior author. The paper also documents multiple other species of ancient fish new to the Arctic, including two new species of pike and the oldest record of the group that includes carp and minnows.

“Many of the fish groups that we think of as being distinctive today in the high-latitude environment in Alaska were already in place at the same time as dinosaurs,” he said.

The discovery of Sivulliusalmo alaskensis — the genus is named from the Inupiaq and Latin words for “to be first” and “salmon,” respectively — adds another 20 million years to the fossil history of the salmon family. Previously, the oldest salmonid documented was in fossils found in British Columbia and Washington.

It’s notable that salmonids, which tend to prefer colder water, were thriving even during the warmth of the Cretaceous, and that they lived for millions of years in regions that have gone through dramatic changes in geography and climate, said Andrés López, curator of fish at the UA Museum of the North and a co-author of the paper.

Despite it being warmer in the Arctic at that time, there would have still been big seasonal swings in temperature and light, just like there are today, he said.

“Salmon were already the kind of fish that do well in a place where those dramatic shifts were happening,” López said. “Despite all of the changes that the planet has gone through, all of the changes in the geography and the climate, you still had the ancestors of the same groups of species that dominate the fresh waters of the region today.”

The new species are the latest discovery to come from the Prince Creek Formation, which is famous for dinosaur fossils found at a series of sites along the Colville River in northern Alaska. In the Cretaceous, Alaska was much closer to the North Pole than it is today. For more than a decade, UAF scientists have been poring over thousands of sometimes microscopic fossils to paint a picture of a polar ecosystem during the age of the dinosaurs, including mammals, birds, and fish.

“These types of fossils are often overlooked,” Druckenmiller said. He and his colleagues intentionally aim to recover all the vertebrate fossils available, no matter how small.

“You couldn’t begin to understand a modern Arctic ecosystem without understanding the smallest animals that live there,” he said. The same is true for ancient ecosystems.

Fish fossils are one of the most abundant types of fossils at the Prince Creek Formation, Druckenmiller said, but they are very difficult to see and distinguish in the field. So, the scientists hauled buckets of fine sand and gravel back to their museum lab, where they used microscopes to find the bones and teeth.

The findings in the current paper are primarily based on tiny, fossilized jaws, some of which would easily fit on the end of a pencil eraser, Druckenmiller said. To get a good look at the fossils, members of the research team from Western University in Ontario and the University of Colorado Boulder used micro-computed tomography to digitally reconstruct the tiny jaws, teeth and other bones.

“We found a really distinct jaw and other parts that we recognized as a member of the salmon family,” he said.

The presence of salmonids in the Cretaceous polar regions and the absence of common lower-latitude fish from this same time period indicate that the salmon family likely originated in the North, Druckenmiller said. “Northern high latitude regions were probably the crucible of their evolutionary history.”

The lead author of the paper is Donald Brinkman of the Royal Tyrrell Museum of Palaeontology. Other UAF co-authors include Lauren Wilson and Zackary Perry. Scientists from Florida State University, the University of Colorado, Princeton University, Western University and LISA CAN Analytical Solutions Inc. also co-authored the paper.


ADDITIONAL INFORMATION: Read the paper in the journal Papers in Palaeontology.


The jaw of the new species of ancient salmonid is compared with jaws from trout and grayling.

Credit

Courtesy of Papers in Palaeontology

Scientists excavate at the site on the Colville River where many of the fish fossils were found.

Credit

UAF photo by Kevin May

 

Heat and land use: Bees suffer in particular




University of Würzburg

Artificial nests 

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Bees wait asleep in an artificial nest made of reed stems for favorable flight conditions. Different species close their nest entrances with clay or plant debris.

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Credit: Cristina Ganuza




The number and diversity of insects is declining worldwide. Some studies suggest that their biomass has almost halved since the 1970s. Among the main reasons for this are habitat loss – for example through agriculture or urbanization – and climate change.

These threats have long been known. What is less well-known is how these global change drivers interact and how their effects can become even more severe that way. For example, insects that have been deprived of their natural habitat could be even more affected by higher temperatures in a new environment.

Researchers at Julius-Maximilians-Universität Würzburg (JMU) have investigated precisely this serious interaction at 179 locations throughout Bavaria. The study is part of the LandKlif research cluster, coordinated by Professor Ingolf Steffan-Dewenter within the Bavarian Climate Research Network bayklif. They have now published their results in the journal Proceedings of the Royal Society B: Biological Sciences.

https://bayklif.de/
https://www.landklif.biozentrum.uni-wuerzburg.de/

Bees are particularly affected

The study shows that insects from different trophic levels react differently to the combination of higher temperatures and more intensive land use. Bees were particularly affected. While populations in forests coped well with the heat, their urban relatives had their numbers reduced by 65 percent.

Like us humans, the animals were not only affected by hot daytime temperatures, but also by the warmer than average nights. Both the number and diversity of bees suffered considerably. “The fact that night-time temperatures have such an impact on diurnal insects is significant. Precisely because average night-time temperatures rise even faster than daytime temperatures,” explains biologist Dr. Cristina Ganuza.

Although insects higher up in the food chain coped better with the heat, they struggled in open agricultural habitats, for example. “This can have a negative impact on agricultural production because insects that contribute to natural pest control should be similarly affected,” Dr. Sarah Redlich continues.

The situation for these insects was better where agricultural land and natural areas were mixed.

Three key findings

The researchers summarize their findings in three key points:

Warmer daytime temperatures lead to higher number and diversity of bees, but only in forests and grasslands, the most natural habitats. Therefore, the preservation and creation of interconnected natural habitats within agricultural and urban areas is of great importance.

Higher night temperatures lead to lower bee richness across all studied habitat types. “This previously unknown negative effect of warmer nights on insects reveals a new threat that requires further research to uncover the underlying physiological mechanisms”, explains Steffan-Dewenter.

Climate change and land use interact, but affect insects at lower or higher positions in the food chain in different ways. “Their different responses could disrupt food webs and important ecosystem functions such as pest control and pollination”, says Ganuza.

Cooperation partners and funding

The JMU-study was carried out in cooperation with the Technical University of Munich, the Weihenstephan-Triesdorf University of Applied Sciences and the University of Bayreuth. It was funded by the Bavarian State Ministry of Science and the Arts.

 

KAIST & CMU unveils Amuse, a songwriting AI-collaborator to help create music​



The Korea Advanced Institute of Science and Technology (KAIST)
Photo 1 

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(From left) Professor Chris Donahue of Carnegie Mellon University, Ph.D. Student Yewon Kim and Professor Sung-Ju Lee of the School of Electrical Engineering

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Credit: KAIST Networking and Mobile Systems Laboratory




Wouldn't it be great if music creators had someone to brainstorm with, help them when they're stuck, and explore different musical directions together? Researchers of KAIST and Carnegie Mellon University (CMU) have developed AI technology similar to a fellow songwriter who helps create music.

 

KAIST (President Kwang-Hyung Lee) has developed an AI-based music creation support system, Amuse, by a research team led by Professor Sung-Ju Lee of the School of Electrical Engineering in collaboration with CMU. The research was presented at the ACM Conference on Human Factors in Computing Systems (CHI), one of the world’s top conferences in human-computer interaction, held in Yokohama, Japan from April 26 to May 1. It received the Best Paper Award, given to only the top 1% of all submissions.

 

 

< (From left) Professor Chris Donahue of Carnegie Mellon University, Ph.D. Student Yewon Kim and Professor Sung-Ju Lee of the School of Electrical Engineering >

 

The system developed by Professor Sung-Ju Lee’s research team, Amuse, is an AI-based system that converts various forms of inspiration such as text, images, and audio into harmonic structures (chord progressions) to support composition.

 

For example, if a user inputs a phrase, image, or sound clip such as “memories of a warm summer beach”, Amuse automatically generates and suggests chord progressions that match the inspiration.

 

Unlike existing generative AI, Amuse is differentiated in that it respects the user's creative flow and naturally induces creative exploration through an interactive method that allows flexible integration and modification of AI suggestions.

 

The core technology of the Amuse system is a generation method that blends two approaches: a large language model creates music code based on the user's prompt and inspiration, while another AI model, trained on real music data, filters out awkward or unnatural results using rejection sampling.

 

 

< Figure 1. Amuse system configuration. After extracting music keywords from user input, a large language model-based code progression is generated and refined through rejection sampling (left). Code extraction from audio input is also possible (right). The bottom is an example visualizing the chord structure of the generated code. >

 

The research team conducted a user study targeting actual musicians and evaluated that Amuse has high potential as a creative companion, or a Co-Creative AI, a concept in which people and AI collaborate, rather than having a generative AI simply put together a song.

 

The paper, in which a Ph.D. student Yewon Kim and Professor Sung-Ju Lee of KAIST School of Electrical and Electronic Engineering and Carnegie Mellon University Professor Chris Donahue participated, demonstrated the potential of creative AI system design in both academia and industry. 
  ※ Paper title: Amuse: Human-AI Collaborative Songwriting with Multimodal Inspirations
       DOI: https://doi.org/10.1145/3706598.3713818
  ※ Research demo video: https://youtu.be/udilkRSnftI?si=FNXccC9EjxHOCrm1
  ※ Research homepage: https://nmsl.kaist.ac.kr/projects/amuse/

 

Professor Sung-Ju Lee said, “Recent generative AI technology has raised concerns in that it directly imitates copyrighted content, thereby violating the copyright of the creator, or generating results one-way regardless of the creator’s intention. Accordingly, the research team was aware of this trend, paid attention to what the creator actually needs, and focused on designing an AI system centered on the creator.”

 

He continued, “Amuse is an attempt to explore the possibility of collaboration with AI while maintaining the initiative of the creator, and is expected to be a starting point for suggesting a more creator-friendly direction in the development of music creation tools and generative AI systems in the future.”

 

This research was conducted with the support of the National Research Foundation of Korea with funding from the government (Ministry of Science and ICT). (RS-2024-00337007)

 

Bacterium produces “organic dishwashing liquid” to degrade oil



A study led by the University of Bonn has illuminated the mechanism by which this marine creature produces the detergent


University of Bonn

A. borkumensis 

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The red-marked bacteria with the gene cluster switched off were no longer able to synthesize the detergent. The bacteria were then unable to attach to the surface of oil droplets (left) the way they usually do (right).

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Credit: (c) Dr. Dörmann’s working group / University of Bonn




The marine bacterium Alcanivorax borkumensis feeds on oil, multiplying rapidly in the wake of oil spills, and thereby accelerating the elimination of the pollution, in many cases. It does this by producing an “organic dishwashing liquid” which it uses to attach itself to oil droplets. Researchers from the University of Bonn, RWTH Aachen University, Heinrich Heine University Düsseldorf and research center Forschungszentrum Jülich have now discovered the mechanism by which this “organic dishwashing liquid” is synthesized. Published in the prominent international journal Nature Chemical Biology, the research findings could allow the breeding of more efficient strains of oil-degrading bacteria.

Loosely translated into English, the Latin name of the bacterium is “alkane eaters from Borkum.” Indeed, the name says it all, for alkanes are chains of hydrocarbons that exist in petroleum in large quantities. A. borkumensis feeds on energy-rich chains which occur naturally in the sea—and on non-naturally-occurring chains like those dispersed in oil spills. In many cases the bacteria multiply rapidly, thereby accelerating the pollution-clearing process.

Oil and water don’t mix

Because of the well-known fact that oil and water don’t mix, in order to eat its favorite food, the microscopic sea creature requires a chemical aid. It makes it for itself, producing a kind of natural dishwashing liquid. This “detergent” is a compound consisting of the amino acid glycine and a sugar-fatty acid compound. “The molecules have a water-soluble part and a fat-soluble part,” explains Professor Peter Dörmann, who is a biochemist at the University of Bonn's IMBIO institute (Institute of Molecular Physiology and Biotechnology of Plants). “The bacteria settle on the surface of the oil droplets, where they form a biofilm.”

The mechanism by which the alkane eater synthesizes this detergent was not understood until a working group led by Professor Karl-Erich Jaeger of Forschungszentrum Jülich and the Heinrich Heine University Düsseldorf intensively studied the bacterium’s genome. “In our research we identified a gene cluster which we believed could play a role in production of the molecule,” Professor Jaeger relates. And indeed, when the genes of this cluster were “switched off”, the bacteria were impaired in their ability to attach to oil droplets. “As a result they absorbed less oil, and grew much more slowly,” said Professor Lars Blank of RWTH Aachen University.

Potential biotech applications

A doctoral student of Professor Dörmann, Jiaxin Cui, ultimately succeeded in elaborating the synthetic pathway by which A. borkumensis produces the detergent. Three enzymes are involved in this process, in which the molecule is assembled step by step. The three genes contain the instructions for building these biocatalysts, without which the bonding process cannot efficiently proceed. “We successfully transferred the genes involved to a different bacterium, which then produced the detergent as well,” Cui explains.

Bacteria like A. borkumensis are important for degrading oil pollution, thus these findings are of significant interest, possibly leading to the development of new, more effective strains. “This natural detergent could have biotech applications as well, such as for microbial production of key chemical compounds from hydrocarbons," says Dörmann, who is a member of the University of Bonn Transdisciplinary Research Area (TRA) “Sustainable Futures.”

Institutions involved and funding secured:

The University of Bonn, RWTH Aachen University, the Heinrich Heine University Düsseldorf and Forschungszentrum Jülich were involved in the research study, which was funded by the German Research Foundation (DFG) and the Federal Ministry of Education and Research (BMBF).

 

Study says green consumers focus on brands and fashionability – modest green consumers are characteristic of Finland 




University of Jyväskylä - Jyväskylän yliopisto
Professor Terhi-Anna Wilska 

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“It is interesting that green consumers are nowadays conscious of brands and fashionability, but their share is still quite small,” says the principal investigator, Professor Terhi-Anna Wilska.   

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Credit: Petteri Kivimäki.




Researchers examined the consumer profiles of green and non-green consumers in Finland, Sweden and the United Kingdom and the interconnections of green attitudes and consumers’ background factors, such as income level. Green and non-green consumers were profiled based on how important they considered ecological production, local production, price, quality, brand and fashionability in their latest purchase decision. 

Finland a leader in green consumption  

There was one group that existed in Finland only: modest green consumers. For them, ecological consiousness was important but quality, brands and fashionability did not matter that much. These consumers were older and had lower average income, and they were more typically females than males. 

Slightly over a quarter of Finns considered greenness important in their purchase decision. Roughly half of them were premium green consumers and half modest green consumers. In Sweden, the share of green consumers was clearly smaller: slightly less than one fifth were premium green consumers. In the UK, the proportion was even smaller, only 12%.  

“It is interesting that green consumers are nowadays conscious of brands and fashionability, but their share is still quite small,” says the principal investigator, Professor Terhi-Anna Wilska.   

“In addition, it is notable that we found the group of modest green consumers in Finland,” she says. “There continues to be some ecological thinking typical of agrarian society, especially among older people.”  

Slightly over one fifth of all consumers in Finland were non-green. Surprisingly, in Sweden their share was even greater: over one fourth of consumers did not care if the product they bought was ecological or not. The United Kingdom had the smallest share of non-green consumers, slightly less than every sixth person.   

Lack of information and price not necessarily the main barriers for purchasing green products  

In all three countries, non-green consumers typically had a lower income, and they were older than green consumers. In the UK, they were also more often men than women. The purchasing decisions of non-green consumers strongly reflected their attitudes. In other words, they did not consider ecological thinking important and, as a result, did not make ecological purchasing decisions.   

“It is a general belief that most consumers would like to buy ecological products, but in practice it is prevented by price, lack of knowledge and other situational factors,” says Wilska. “In this study, we did not really identify any conflict between attitudes and behaviour, which is interesting and requires further investigation.”  

The study, conducted by the Department of Social Sciences and Philosophy at the University of Jyväskylä and LUT University, is part of the DigiConsumers project funded by the Strategic Research Council that works in connection with the Research Council of Finland. The research is based on a survey conducted in Finland, Sweden and Great Britain in the spring of 2021 among 3,000 respondents aged 18 to 75.   

Wilska, T-A, Rantala, E. & Nyrhinen, J. (2025). Profiles of green and non-green consumers: A three-country study. Cleaner and Responsible Consumption 16, 2025, 100260  

https://doi.org/10.1016/j.clrc.2025.100260  

  

For further information: Professor Terhi-Anna Wilska, terhi-anna.wilska@jyu.fi, tel. +358408054201