Wednesday, March 26, 2025

 

Developing a clearer understanding of permafrost thaw risk in Alaska



Researchers developed a method that uses high-resolution satellite imagery and deep machine learning to double the mapped infrastructure of Alaska and more accurately project economic risks associated with permafrost thaw




University of Connecticut





In the Arctic, permafrost plays a crucial role in building infrastructure. However, as the region warms and permafrost thaws, infrastructure is threatened as the ground shifts beneath the built environment. Unfortunately, the full extent of the risks associated with this process is not yet realized, but researchers are working to address this knowledge gap.

UConn Department of Natural Resources and the Environment researchers including PhD student Elias Manos and Assistant Professor Chandi Witharana, and Anna Liljedahl from the Woodwell Climate Research Center developed a method that uses high-resolution satellite imagery and deep machine learning to double the mapped infrastructure of Alaska and more accurately project economic risks associated with permafrost thaw. Their findings are published in Nature Communications Earth and Environment.

Witharana says this is the latest in his research group’s long-term study of how satellites can help monitor changes in the Arctic landscape over time, in this case, the largely unaccounted for risks of thawing permafrost for communities and their vital infrastructure like buildings and roads.

“The main focus here is there was a visual gap for infrastructure, and we need to have more detail to create critical information layers for downstream analysis like economic risk. We didn’t have that for Alaska,” says Witharana.

The motivation behind this research stems from the need to understand hazards in a changing world, says Manos. However, those assessments cannot happen without a clear understanding of what is in harm’s way.

“We know that local temperatures are rising and there is change in the frequency, intensity, and timing of extreme weather and hazardous events. Whether they are rapid onset events like hurricanes, flooding, wildfires, or slow onset hazards like droughts, permafrost thaw in this case, we need to understand the potential harm these events pose,” says Manos.

Manos says that permafrost serves as a structural foundation where piles are secured through it and buildings are designed to help maintain its thermal integrity. It is, therefore, essential that the pile foundation remains stably anchored into the permafrost, but the structural integrity is compromised as this layer thaws.

“When the temperature of permafrost starts to increase, piles start to shift out of place, and that's what we call bearing capacity loss, or decrease in bearing capacity. That was the main hazard that we looked at which impacts buildings,” says Manos. “Then there's also transportation infrastructure that's primarily impacted by ground subsidence. When ice-rich permafrost thaws, the ground will cave in and that was the hazard we used to assess the disaster risk for roads.”

Previous studies made risk estimates based on data from OpenStreetMap (OSM), which is one of the most widely used geospatial data sets available, says Manos. OSM is available for every nation across the globe, and information is updated by volunteers who manually input local data, like buildings, trails, roads, or other kinds of infrastructure, from high-resolution imagery on a global scale.

For some regions, like Europe and parts of the United States, the data is accurate says Manos, but that is not true for all locations. Unfortunately for the Arctic, OSM data is lacking.  

“There are several previous risk studies that relied on this incomplete infrastructure data. It all goes back to the fact that infrastructure across the Arctic is not completely mapped, and that's problematic if you want to understand disasters because you must have the full picture to understand the scale of what is or could potentially be exposed,” says Manos.

One of the objectives of Witharana’s research group is to improve methods to analyze large sets of satellite images quickly and accurately. Here, they developed a method to accurately map infrastructure and permafrost thaw risk called High-resolution Arctic Built Infrastructure and Terrain Analysis Tool (HABITAT). The model uses machine learning and AI to extract road and building information from high-resolution satellite images from the years 2018-2023. They compared the HABITAT data with OSM data to evaluate the new model’s quality and to look for potential misclassifications. Then they added the new information to OSM, nearly doubling the previous amount of information available for Alaska.

“The sheer amount of infrastructure and buildings that were missing from Open Street Map was, really shocking to me, 47% missing,” says Manos. “Though OpenStreetMap is a powerful volunteer-based resource, it has limitations and that is not a surprise.”

Owing to the large amount of data previously not considered, the researchers estimate that the costs of permafrost damage to infrastructure will double under low and medium emissions scenarios by 2050.

“Damages to infrastructure caused by permafrost thaw is on par with the average yearly cost of all natural disasters in the country, yet permafrost thaw is not recognized by the federal government as a natural hazard making it harder for people in Alaska to obtain disaster relief funding. In addition, Alaska is decades behind the rest of the country in terms of geospatial data readiness. Maps are key for assessments and planning and I think the research community can help with some of that,” says Liljedahl.

Witharana’s research group and collaborators are working to fill these knowledge gaps to create data that can be used to help prepare communities for the future. Manos plans to expand this analysis to account for the entire Arctic region to assess economic losses using a comprehensive infrastructure map.

Witharana adds that by combining OSM data with the thousands of sub-meter resolution satellite images provided by the National Science Foundation, along with access to NSF supercomputing infrastructure, it was possible for the researchers to enhance the completeness of these datasets.

“We can see that impact and do better assessments of economic disturbances and risk so we can prepare for whatever policy actions or downstream efforts that are needed,” says Witharana “That’s a major outcome. Overall, the integration of AI and big data sets within our application has helped make useful, actionable products that researchers and communities can use right now.”

 

The combined HABTAT and OSM dataset is available for anyone to explore on the Permafrost Discovery Gateway. This work is funded by the U.S. National Science Foundation’s Office of Polar Programs (NSF-OPP) (grant No. 1927723 and 2052107) and Google.org’s Impact Challenge on Climate Innovation. The image in Fig. 1b was acquired and provided through NSF RISE-1928237. Furthermore, this work used the Delta supercomputer at the National Center for Supercomputing Applications at the University of Illinois Urbana-Champaign through allocation #EES220055 from the Advanced Cyberinfrastructure Coordination Ecosystem: Services & Support (ACCESS) program, which is supported by National Science Foundation grants #2138259, #2138286, #2138307, #2137603, and #2138296. Geospatial support for this work was provided by the Polar Geospatial Center under NSF-OPP awards 10436811559691, and 2129685. 

Coral diseases and water quality play a key role for coral restoration and survival efforts



Coral restoration programs are expanding to revive coral populations and ecosystem services, but local and global stressors such as coral disease and water pollution still threaten coral survival



University of Miami Rosenstiel School of Marine, Atmospheric, and Earth Science

oral diseases and water quality play a key role for coral restoration and survival efforts 

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A healthy staghorn coral fragment donated by the coral nurseries – representative of a healthy coral fragment

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Credit: Diana Udel, University of Miami




Coral restoration programs are expanding to revive coral populations and ecosystem services, but local and global stressors such as coral disease and water pollution still threaten coral survival.

Miami, FL – Coral diseases, particularly in the Caribbean, have caused major declines in coral populations, especially affecting staghorn (Acropora cervicornis) and Elkhorn (A. palmata) corals, which play a crucial role in reef ecosystems. Despite efforts to identify the pathogens that cause diseases like White Band Disease (WBD), and Stony Coral Tissue Loss Disease (SCTLD), the specific agents remain largely unknown. Coral restoration programs aim to restore these once abundant coral species, but the effectiveness is threatened by multiple stressors, including increases in disease frequency and nutrient pollution caused from runoff from land-based activities.

A recent study by scientists at the University of Miami NOAA Cooperative Institute for Marine and Atmospheric Studies (CIMAS), and the Atlantic Oceanographic and Meteorological Laboratory (AOML), which examined threatened Staghorn coral species (Acropora cervicornis), has uncovered important insights into how different coral genotypes respond to environmental stressors. The findings indicate that while some coral genotypes displayed resistance to either high nutrient levels or disease, none were resistant to both stressors simultaneously. 

The scientists tested 10 genotypes commonly used in coral restoration in South Florida. Coral samples were collected from different offshore nurseries from (Coral Restoration Foundation, Florida Fish and Wildlife, and Rosenstiel’s Rescue a Reef Program) and transported to the CIMAS Experimental Reef Lab where they were exposed to two nutrient conditions: normal (ambient) or high ammonium levels for about 1.5 months. After this period, each coral was either exposed to a coral diseased tissue slurry or a healthy tissue slurry (i.e., placebo), creating four treatment groups: normal nutrients + placebo, normal nutrients + disease, high nutrients + placebo, and high nutrients + disease.

Key findings include:

•    Coral genotypes that previously showed disease resistance did not necessarily maintain that resistance in this experiment, suggesting disease susceptibility may change based on disease cause, environment, or route of infection.

•    Elevated dissolved inorganic nitrogen, in the form of ammonium, reduced coral survival—even in the absence of disease—highlighting poor water quality as a significant threat.

•    When exposed to disease under normal conditions, four genotypes suffered complete mortality, while others showed varying degrees of resilience.

•    When both stressors were combined, all genotypes experienced mortality rates ranging from 30 to 100 percent.

The researchers reinforce the urgent need for improving water quality by limiting runoff to support coral conservation efforts. Since coral disease outbreaks often coincide with pollution-related stress, reducing nutrient pollution is critical to enhancing coral resilience and increasing the success of restoration projects.

"If water quality issues are not addressed, it will be difficult for both wild and restored coral colonies in Florida to survive." said Ana Palacio, the lead author of the study and a research scientist at CIMAS. "Our findings highlight the importance of selecting coral genotypes that are resilient to local stressors and ensuring improved water conditions before restoration efforts."

Coral reefs provide essential ecosystem services, including coastal protection, marine biodiversity, and economic benefits to fisheries and tourism. This study underscores the importance of science-driven policymaking and conservation strategies to safeguard these vital ecosystems for the future.

The study titled: ­­­­­­­­­ “Genotypes of Acropora cervicornis in Florida show resistance to either elevated nutrients or disease, but not both in combination” was published in the journal PLOS One on March 26, 2025.  The authors include Ana M. Palacio-Castro1,2, *, Danielle Kroesche3-4, Ian Enochs2, Chris Kelble2, Ian Smith1,2, Andrew C. Baker3, Stephanie M. Rosales1,2

Funding for the study was provided to Ana M Palacio-Castro, through the National Academy of Sciences’ National Research Council (NRC) Postdoctoral Fellowship and the Coral Reef Conservation Program (Grant 31250)

1 Cooperative Institute for Marine and Atmospheric Studies, University of Miami, Miami, Florida, USA, 2 Atlantic Oceanographic and Meteorological Laboratory, NOAA, Miami, Florida, USA, 3 Department of Marine Biology and Ecology, University of Miami, Miami, Florida, USA,4 NOVA Southeastern University, Davie, Florida, USA

  

Stephanie Rosales (left) and Ana Palacio (right) evaluating staghorn coral genotypes during their exposure to elevated nutrients

Diseased corals collected to use for disease slurry

An experimental fragment that developed a disease lesion after exposure to disease slurry

Credit

Stephanie Rosales, University of Miami

Stephanie Rosales (left) and Ana Palacio, lead author of the study (right), evaluating diseased corals


Tissue samples collected from a fragment that developed disease signs

Credit

Diana Udel, University of Miami

 

Fossils: Ancient parasitic ‘Venus flytrap’ wasp preserved in amber




BMC (BioMed Central)
Holotype of Sirenobethylus charybdis 

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Holotype of Sirenobethylus charybdis 

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Credit: Qiong Wu





An extinct lineage of parasitic wasps dating from the mid-Cretaceous period and preserved in amber may have used their Venus flytrap-like abdomen to capture and immobilise their prey. Research, published in BMC Biology, finds that the specimens of Sirenobethylus charybdis — named for the sea monster in Greek mythology which swallowed and disgorged water three times a day  date from almost 99 million years ago and may represent a new family of insects.

The morphology of S. charybdis indicates the wasps were parasitoids — insects whose larvae live as parasites and eventually kill their hosts. Modern-day parasitoids of the superfamily Chrysidoidea include cuckoo wasps and bethylid wasps. However, the S. charybdis specimens possess a unique pattern of veins in the hind wing that suggests the species belongs within its own family, the Sirenobethylidae.

Taiping Gao, Lars Vilhelmsen, and colleagues from the Capital Normal University, China, and the Natural History Museum of Denmark used Micro-CT scanning to analyse 16 female S. charybdis specimens preserved in amber dated to 98.79 million years ago. These specimens were collected from the Kachin region in northern Myanmar. They find the species was likely to have been a koinobiont — a parasitoid which allows its host to continue growing while feeding on it. The wasp specimens have an abdominal apparatus comprised of three flaps, the lower of which forms a paddle-shaped structure with a dozen hair-like bristles, visually reminiscent of a Venus flytrap plant. The authors note the abdominal apparatus of S. charybdis is unlike that of any known insect, and may have served as a mechanism to temporarily restrain the host during egg-laying. As the wasp was likely unable to pursue prey over long distances, they speculate that it would have waited with the apparatus open for a potential host to activate its capture response.

The authors believe the elaborate grasping apparatus allowed S. charybdis to target highly mobile prey such as small, winged or jumping insects. The preserved specimens suggest that Chrysidoidea displayed a wider range of parasitoid strategies in the mid-Cretaceous period than their present-day counterparts.

New species revealed after 25 years of study on ‘inside out’ fossil – and named after discoverer’s mum



Study from University of Leicester describes a new species of fossil that is 444 million years-old with soft insides perfectly preserved



University of Leicester

Keurbos susanae 

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The fossil Keurbos susanae - or Sue - in the rock.

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Credit: University of Leicester




A new species of fossil from 444 million years ago that has perfectly preserved insides has been affectionately named ‘Sue’ after its discoverer’s mum.

The result of 25 years of work by a University of Leicester palaeontologist and published in the journal Palaeontology, the study details a new species of multisegmented fossil and is now officially named as Keurbos susanae.

Lead author Professor Sarah Gabbott from the School of Geography, Geology and the Environment said: “‘Sue’ is an inside-out, legless, headless wonder. Remarkably her insides are a mineralised time-capsule: muscles, sinews, tendons and even guts all preserved in unimaginable detail. And yet her durable carapace, legs and head are missing – lost to decay over 440 million years ago.

“We are now sure she was a primitive marine arthropod but her precise evolutionary relationships remain frustratingly elusive.”

Today about 85% of animals on Earth are arthropods, and they include shrimps, lobsters, spiders, mites, millipedes and centipedes.

They have an excellent fossil record stretching back over 500 million years but usually their fossil remains are of their external features, whereas ‘Sue’ is the complete opposite because it is her insides that are fossilized.

The fossil was found in the Soom Shale, a band of silts and clays at a location 250 miles north of Cape Town in South Africa. These strata were laid down on the seafloor over 440 million years ago at a time when a devastating glaciation had wiped out about 85% of Earth’s species – one of the big five ‘mass extinctions’. It seems that the marine basin in which ‘Sue’ swam was somehow protected from the worst of the freezing conditions and a fascinating community of animals, including ‘Sue’, took refuge there.

The conditions in the sediments where Sue came to rest were toxic in the extreme. There was no oxygen but worse than that there was deadly (and stinking) hydrogen sulphide dissolved in the water. The researchers suspect that a strange chemical alchemy was at work in creating the fossil and its unusual inside-out preservation.

But there is a downside, because the unique preservation of ‘Sue’ makes it difficult to compare her to other fossils of the era and so it remains a mystery how she fits into the evolutionary tree of life.

The small roadside quarry where Professor Gabbott found the fossils 25 years ago at the start of her academic career has all but disappeared and so other specimens are unlikely to be found. The fossil was incredibly difficult to interpret and Professor Gabbott held out hope of finding another specimen with its head or legs intact.

Professor Gabbott adds: “This has been an ultramarathon of a research effort. In a large part because this fossil is just so beautifully preserved there’s so much anatomy there that needs interpreting. Layer upon on layer of exquisite detail and complexity. I’d always hoped to find new specimens but it seems after 25 years of searching this fossil is vanishingly rare – so I can hang on no longer. Especially as recently my mum said to me ‘Sarah if you are going to name this fossil after me, you’d better get on and do it before I am in the ground and fossilized myself’.

“I tell my mum in jest that I named the fossil Sue after her because she is a well-preserved specimen! But, in truth, I named her Sue because my mum always said I should follow a career that makes me happy – whatever that may be. For me that is digging rocks, finding fossils and then trying to figure out how they lived what they tell us about ancient life and evolution on Earth.”


Professor Sarah Gabbott from the University of Leicester School of Geography, Geology and the Environment, at the site where the fossil was discovered.

Professor Sarah Gabbott from the University of Leicester School of Geography, Geology and the Environment, at the site where the fossil was discovered.

Professor Sarah Gabbott from the University of Leicester School of Geography, Geology and the Environment, at the site where the fossil was discovered.

Credit

University of Leicester