Wednesday, September 17, 2025

USC Stem Cell-led team makes major advance toward building a synthetic kidney



Scientists combine kidney filtering and urine-concentrating components to create “assembloids,” the most mature and complex kidney structures ever grown in a lab and a tool for developing new therapies.




Keck School of Medicine of USC

Lab grown human kidney assembloid 

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Lab grown human kidney assembloid showing the formation of radial nephrons connected to a central collecting system.

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Credit: Image by Pedro Medina/Li Lab






A USC Stem Cell-led research team has achieved a major step forward in the effort to build mouse and human synthetic kidneys. In a new paper published in Cell Stem Cell, the scientists describe generating more mature and complex lab-grown kidney structures, or organoids, than ever before. 

“This is a revolutionary tool for creating more accurate models for studying kidney disease, which affects one in seven adults,” said corresponding author Zhongwei Li, associate professor of medicine, and stem cell biology and regenerative medicine at the Keck School of Medicine of USC. “It’s also a milestone towards our long-term goal of building a functional synthetic kidney for the more than 100,000 patients in the U.S. awaiting transplant—the only cure for end-stage kidney disease.”

Scientists from the Li Lab previously constructed organoids composed of nephrons, the kidney’s filtering units. They had also produced organoids resembling the kidney’s collecting ducts, which concentrate urine.

Now, led by first authors Biao Huang, Pedro Medina, and Zipeng Zeng from the Li Lab, and Jincan He from Tongji University in Shanghai, the team has successfully combined nephron and collecting duct components to produce what they have dubbed “assembloids.”

The scientists first optimized conditions for growing mouse and human assembloids in the lab. They then transplanted the mouse and human assembloids into living mice, where they further matured—growing larger, and developing connective tissue and blood vessels.

“By maturing the assembloids in the native environment of the body, we tapped into kidney progenitor cells’ natural ability to self-assemble,” said Li. “We believe this will be a key to succeeding in the complex endeavor of building functional synthetic kidneys.”

Both mouse and human assembloids exhibited kidney-like functions, such as blood filtration, the uptake of proteins such as albumin, the capacity to secrete kidney hormones, and early signs of urine production.

While previous kidney organoids only matured to an embryonic stage, the mouse assembloids achieved the same level of maturity as a newborn mouse kidney, based on gene activity and other benchmarks. Human assembloids also matured beyond the embryonic stage, although their precise maturity level could not be determined due to the lack of available newborn human kidney samples. 

The study also provides a proof-of-concept that assembloids can serve as high-fidelity models for studying complex human kidney diseases. As an example, the scientists grew human assembloids from cells with a single genetic change—the loss of a functional PKD2 gene—that causes autosomal dominant polycystic kidney disease, a genetic condition where the kidneys develop multiple large cysts that impair their function. These diseased assembloids grew into large human kidney cysts in living mice and exhibited complex disease features such as inflammation and fibrosis, that could not be modeled before. 

“Our study provides a powerful new tool for studying a wide range of complex kidney diseases,” said Li, “as well as strong foundation for engineering functional synthetic kidneys as a lifesaving option for the patients who need them.”

About the study

Additional authors are: Sunghyun Kim, Janet Romo, Kari Koppitch, Chennan C. Zhang, Georgina Gyarmati, Jinjin Guo, Tianyi Ma, Megan E. Schreiber, Cong Xu, Jessica Pham, Riana K. Parvez, Jackson Su, Mateo W. Xia, Danny El-Nachef, Charles E. Murry, Justin Ichida, Nils O. Lindström, Nuria M. Pastor-Soler, Kenneth R. Hallows, Janos Peti-Peterdi, and Andrew P. McMahon from USC; Yohan Park and Kurt Zimmerman from the University of Oklahoma Health Sciences Center; Ruslan Bohovyk and Alexander Staruschenko from the University of South Florida; Pierre-Emmanuel Yoann N’Guetta and Lori O’Brien from the University of North Carolina at Chapel Hill; Zhenqing Liu from City of Hope; Laura Perin from Children’s Hospital Los Angeles; Sanjeev Kumar from Cedars-Sinai Medical Center; and Cizhong Jiang from Tongji University in Shanghai.

70% percent of this work was supported by federal funding from the National Institutes of Health (NIH Director’s Award DP2DK135739; research grants DK054364, DK064324, DK123564, DK135290, and DK136802; and training grant T32HD060549). Additional support came from a Chan Zuckerberg Initiative seed network grant (CZIF2019-002430), the University Kidney Research Organization (UKRO), a Keck School of Medicine of USC Dean’s Pilot Award, a USC Stem Cell Challenge Award, and a California Institute for Regenerative Medicine (CIRM) Predoctoral Fellowship (EDUC4-12756).

 

Disclosures

McMahon is a scientific advisor or consultant for eGENESIS, Trestle Biotherapeutics, GentiBio and IVIVA Medical. Peti-Peterdi and Gyarmati are co-founders of Macula Densa Cell LLC, a biotechnology company that develops therapeutics to target macula densacells for a regenerative treatment for chronic kidney disease. Macula Densa Cell LLC has a patent entitled “Targeting macula densacells as a new therapeutic approach for kidney disease” (US patents 10,828,374 and 11,318,209). Li, Huang, Medina, Zeng, and McMahon have applied for intellectual property protection on technologies discussed here.

Repeated head impacts cause early neuron loss and inflammation in young athletes



NIH-funded study reveals brain changes long before chronic traumatic encephalopathy (CTE) develops


NIH/Office of the Director






Research supported by the National Institutes of Health (NIH) shows that repeated head impacts from contact sports can cause early and lasting changes in the brains of young- to middle-aged athletes. The findings show that these changes may occur years before chronic traumatic encephalopathy (CTE) develops its hallmark disease features, which can now only be detected by examining brain tissue after death. 

“This study underscores that many changes in the brain can occur after repetitive head impacts,” said Walter Koroshetz, M.D., director of NIH’s National Institute of Neurological Disorders and Stroke (NINDS). “These early brain changes might help diagnose and treat CTE earlier than is currently possible now.” 

Scientists at the Boston University CTE Center, the U.S. Department of Veterans Affairs Boston Healthcare System and collaborating institutions analyzed postmortem brain tissue from athletes under age 51. Most of them had played American football. The team examined brain tissue from these athletes, using cutting-edge tools that track gene activity and images in individual cells. Many of these tools were pioneered by the NIH’s Brain Research Through Advancing Innovative Neurotechnologies® Initiative, or The BRAIN Initiative®. The researchers identified many additional changes in brains beyond the usual molecular signature known to scientists: buildup of a protein called tau in nerve cells next to small blood vessels deep in the brain’s folds.  

 

For example, the researchers found a striking 56% loss of a specific type of neurons in that particular brain area, which takes hard hits during impacts and also where the tau protein accumulates. This loss was evident even in athletes who had no tau buildup. It also tracked  with the number of years of exposure to repetitive head impacts. The findings thus suggest that neuronal damage can occur much earlier than is visible by the currently known CTE disease marker tau. The team also observed that the brain’s immune cells, called microglia, became increasingly activated in proportion to the number of years the athletes had played contact sports. 

The study also revealed important molecular changes in the brain’s blood vessels. These changes included gene patterns that could signal immune activity, a possible reaction to lower oxygen levels in nearby brain tissue, and thickening and growth of small blood vessels. Together with these findings, the researchers identified a newly described communication pathway between microglia and blood vessel cells.  The authors suggest that this crosstalk may help explain how early cellular problems set the stage for disease progression long before CTE becomes visible. 

The study is one of the first to focus on younger athletes, shifting attention from advanced CTE in older people to the earliest cellular signatures of damage.  

“What’s striking is the dramatic cellular changes, including significant, location-specific neuron loss in young athletes who had no detectable CTE,” said Richard Hodes, M.D., director of NIH’s National Institute on Aging (NIA). “Understanding these early events may help us protect young athletes today as well as reduce risks for dementia in the future.” 

By revealing the earliest cellular warning signs, this work lays the foundation for new ways to detect brain effects of repetitive head injuries and potentially lead to interventions that could prevent devastating CTE neurodegeneration.  

This research was supported by NINDS and NIA through grants F31NS132407, U19AG068753, RF1AG057902, R01AG062348, R01AG090553, U54NS115266, and P30AG072978. 

Reference: Butler MLMD, Pervaiz N, Breen K. et al. Repeated head trauma causes neuron loss and inflammation in young athletes. Nature (2025). DOI: 10.1038/s41586-025-09534-6 

 

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About the National Institute of Neurological Disorders and Stroke (NINDS): NINDS is the nation’s leading funder of research on the brain and nervous system. The mission of NINDS is to seek fundamental knowledge about the brain and nervous system and to use that knowledge to reduce the burden of neurological disease. https://www.ninds.nih.gov/  

About the National Institute on Aging (NIA): NIA seeks to understand the nature of aging and diseases associated with growing older, with the goal of extending the healthy, active years of life. https://www.nia.nih.gov/  

About the National Institutes of Health (NIH): NIH, the nation's medical research agency, includes 27 Institutes and Centers and is a component of the U.S. Department of Health and Human Services. NIH is the primary federal agency conducting and supporting basic, clinical, and translational medical research, and is investigating the causes, treatments, and cures for both common and rare diseases. For more information about NIH and its programs, visit https://www.nih.gov/.  

 

NIH…Turning Discovery Into Health® 

 BU study of young athletes finds neurodegeneration might begin before CTEa



These results have the potential to significantly change our perspective on contact sports.



Boston University School of Medicine


(BOSTON) This fall, tens of millions of people will be at risk for chronic traumatic encephalopathy (CTE), a degenerative brain disease caused by repeated head impacts from contact sports like football, soccer, and ice hockey, or military service. Researchers have long suspected that the brain begins changing years before CTE appears, but proof has been elusive because CTE can only be definitively diagnosed after death.

A new study led by researchers from Boston University Chobanian & Avedisian School of Medicine, published in Nature, has revealed a cascade of “repetitive head impact (RHI)-related brain injuries” resulting in brain cell loss, inflammation and vascular damage in young former contact sport athletes. Importantly, many of the changes were seen in athletes before the onset of CTE.

“These results have the potential to significantly change how we view contact sports.  They suggest that exposure to RHI can kill brain cells and cause long-term brain damage, independent of CTE,” said corresponding author Jonathan Cherry, PhD, assistant professor of pathology & laboratory medicine and director of the digital pathology core at the BU CTE Center.

To identify the earliest changes from RHI, researchers performed single nucleus RNA sequencing on the frozen human brain tissue from 28 men between the ages of 25 and 51. They were divided into three groups: a control group of eight men who didn’t play contact sports; an RHI group comprised of eight American football players and a soccer player, none of whom were diagnosed with CTE; and a CTE group of 11 contact-sport athletes with low-stage  (defined as Stage 1 or 2) CTE. All results were further validated and confirmed in larger sample sets and through comparison to other published studies.

As previously published, athletes diagnosed with low-stage CTE had significant inflammatory and vascular changes. However, this study showed similar levels of vascular injury and inflammation in athletes without CTE, suggesting that RHI-related brain injury is not solely dependent on CTE.

One of the most striking findings was a 56% loss of neurons, cells vital to normal brain function, in young athletes participating in contact sports. The loss of neurons was precisely at the cortical sulcal depths, the brain regions that undergo the highest mechanical forces during head impact injury, and where CTE first develops. Neuron loss was observed in all athletes, regardless of whether they had CTE.

“You don't expect to see neuron loss or inflammation in the brains of young athletes because they are generally free of disease. These findings suggest that repetitive head impacts cause brain injury much earlier than we previously thought,” said Cherry. “The risk for CTE is directly related to repetitive head impact exposure in contact sports. These results highlight that even athletes without CTE can have substantial brain injury. Understanding how these changes occur, and how to detect them during life, will help the development of better prevention strategies and treatments to protect young athletes.”

“This groundbreaking study shows that repetitive hits to the head, including concussions and the more frequent non-concussive impacts, cause brain damage in young people even before CTE. These findings should serve as a call to reduce head hits in contact sports at all levels, including youth, high school and college,” adds coauthor Ann McKee, MD, director of the BU CTE Center and William Fairfield Warren Distinguished Professor of Neurology and Pathology at BU.

 

About the BU CTE Center

The BU CTE Center is an independent academic research center at the Boston University Avedisian & Chobanian School of Medicine. It conducts pathological, clinical and molecular research on CTE and other long-term consequences of repetitive brain trauma in athletes and military personnel. For people considering brain donation, click here. To support its research, click here

 

This work was supported by grant funding from: NINDS (F31NS132407), NIH (U19-AG068753), NIA (AG057902, AG062348, AG090553), NINDS (U54NS115266), National Institute of Aging Boston University AD Center (P30AG072978); Department of Veterans Affairs Biorepository (BX002466), and the Department of Veterans Affairs Career Development Award (BX004349), BLRD Merit Award (I01BX005933).

Soccer headers and brain health: Study finds changes within folds of the brain





American Academy of Neurology



MINNEAPOLIS — In amateur soccer players, more frequent heading, or using the head to control or pass the ball, is linked to alterations within the folds of the brain, according to a study published on September 17, 2025, in Neurology®, the medical journal of the American Academy of Neurology. The study does not prove that soccer heading causes brain changes, it only shows an association.

“While taking part in sports has many benefits, including possibly reducing the risk of cognitive decline, repetitive head impacts from contact sports like soccer may offset those potential benefits,” said study author Michael L. Lipton, MD, PhD, of Columbia University in New York City. “Our study found that people who experienced more impacts from headers had more disruptions within a specific layer in the folds of the brain, and that these disruptions were also linked to poorer performance on thinking and memory tests.”

The study included 352 amateur soccer players with an average age of 26 and 77 athletes in non-collision sports with an average age of 23.

Athletes’ soccer activity was surveyed to estimate the number of head impacts over one year. Soccer players were divided into four groups with the highest group having an average of 3,152 headers per year compared to 105 headers in the lowest group.

Athletes had brain scans. Researchers used the scans to examine the microstructure of the juxtacortical white matter within the folds of the brain. This layer of white matter lays alongside the gray matter of the cerebral cortex, the outer layer of the brain.

When analyzing scans, researchers looked at how water molecules moved in the folds of this brain layer.

They found that soccer players in the highest group had much greater disruption in the microstructure of this area of the brain compared to soccer players in the lowest group and non-collision sport athletes. As the number of headers increased, the organization of water molecule movement deteriorated, indicating more disruptions and suggesting worsening of the brain’s microstructure.

Athletes took tests to examine thinking and memory skills. Researchers found that players with worse performance on tests had more disorganized movement of water molecules in this area of the brain.

Researchers found that disruptions in the folds of the orbitofrontal brain region, just above the eye sockets, partially affected the relationship between repeated head impacts and thinking and memory performance.

“Our findings suggest that this layer of white matter in the folds of the brain is vulnerable to repeated trauma from heading and may be an important place to detect brain injury,” said Lipton. “More research is needed to further explore this relationship and develop approaches that could lead to early detection of sports-related head trauma.”

A limitation of the study was that the number of headers over the previous year was estimated based on athlete responses and may be influenced by their ability to remember this information accurately.

The study was supported by the Dana Foundation David Mahoney Neuroimaging Program and the National Institute of Neurological Disorders and Stroke.

Discover more about concussion at BrainandLife.org, from the American Academy of Neurology. This resource also offers a magazine, podcast, and books that connect patients, caregivers and anyone interested in brain health with the most trusted information, straight from the world’s leading experts in brain health. Follow Brain & Life® on FacebookX, and Instagram.

The American Academy of Neurology is the leading voice in brain health. As the world’s largest association of neurologists and neuroscience professionals with more than 40,000 members, the AAN provides access to the latest news, science and research affecting neurology for patients, caregivers, physicians and professionals alike. The AAN’s mission is to enhance member career fulfillment and promote brain health for all. A neurologist is a doctor who specializes in the diagnosis, care and treatment of brain, spinal cord and nervous system diseases such as Alzheimer's disease, stroke, concussion, epilepsy, Parkinson's disease, multiple sclerosis, headache and migraine.

Explore the latest in neurological disease and brain health, from the minds at the AAN at AAN.com or find us on FacebookXInstagramLinkedIn, and YouTube.

 

Researchers develop first "dynamic" soft electrode for brain-computer interfaces



Chinese Academy of Sciences Headquarters






In brain-computer interfaces (BCIs) and other neural implant systems, electrodes serve as the critical interface and are core sensors linking electronic devices with biological nervous systems. Most currently implanted electrodes are static: Once positioned, they remain fixed, sampling neural activity from only a limited region. Over time, they often elicit immune responses, suffer signal degradation, or fail entirely, which has hindered the broader application and transformative potential of BCIs.

In a study published in Nature on September 17, a team led by Prof. LIU Zhiyuan, Prof. XU Tiantian and Assoc. Prof. HAN Fei from the Shenzhen Institute of Advanced Technology of the Chinese Academy of Sciences, along with Prof. YAN Wei from Donghua University, reported a soft, movable, long-term implantable fiber electrode called "NeuroWorm," marking a radical shift for bioelectronic interfaces from static operation to dynamic operation and from passive recording to active, intelligent exploration. 

The design of NeuroWorm is inspired by the earthworm's flexible locomotion and segmented sensory system. By employing sophisticated electrode patterning and a rolling technique, the researchers transformed a two-dimensional array on an ultrathin flexible polymer into a tiny fiber approximately 200 micrometers in diameter. 

This miniature NeuroWorm integrated up to 60 independent signal channels along its length, resembling a highly sophisticated sensory highway. Crucially, the tip of the fiber was equipped with a small magnetic module, enabling wireless steering of the implanted device via external magnetic fields. With this setup, NeuroWorm effectively recorded high-quality spatiotemporal signals in situ while being steered within the brain or along muscle tissue as needed.

To validate NeuroWorm's ability to navigate within muscle fascia, the researchers implanted it through a minimally invasive, half-centimeter incision in a rat and then used external magnets to guide its daily movement across muscle surfaces. X-ray images showed the biomimetic motion, which resembles a microscale bionic worm gliding smoothly between tissue layers. During the seven-day post-implantation period, the device demonstrated the capability to relocate across various positions while concurrently capturing clear and stable electromyographic (EMG) signals from all channels. This functionality effectively realizes dynamic and precise monitoring with the principle of "measurement on demand at targeted locations."

The researchers implanted a single NeuroWorm in a rat's leg muscle for over 43 weeks, during which it continuously and stably recorded EMG signals. The fibrotic encapsulation thickness was less than 23 micrometers, much thinner than the 451 micrometers typically observed with conventional rigid electrodes. In addition, the researchers navigated the NeuroWorm through a rabbit's brain, guiding it from the cortex into subcortical regions while capturing high-quality neural signals throughout its trajectory. These examples underscore the device's biocompatibility and long-term stability. 

This study provides a solution to enable noninvasive repositioning of implants via magnetic guidance, potentially eliminating surgeries due to drift or misplacement. NeuroWorm offers a smarter, more soft, and less invasive platform for long-term, multisite neural monitoring with potential applications in BCls, smart prosthetics, epilepsy mapping, and the management of chronic neurological disorders.

 

The origin of our digits



Scientists from UNIGE, EPFL, and the Collège de France show that a regulatory region of the genome, initially dedicated to the formation of the fish cloaca, has been co-opted by evolution to guide the development of digits.




Université de Genève

The origin of our digits 

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To develop their digits, ancestral tetrapods recycled an ancient region of the genome that was initially active in the formation of the fish cloaca. This is illustrated here by the expression of a Hox architect gene in the cloaca of the zebrafish (black dot).

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Credit: © Brent Hawkins, Harvard




How did digits evolve? While it is clear that they derive from genetic programs already present in fish, their precise origin remained a matter of debate. An international team led by the University of Geneva (UNIGE) with EPFL, the Collège de France, and the universities of Harvard and Chicago has come up with an unexpected answer: digits may have evolved from the reuse of an ancient region of the genome, initially active in the formation of the fish cloaca rather than their fins. Published in Nature, this discovery reveals a major evolutionary strategy that consists of recycling what already exists rather than building something new.


380 million years ago, our fish ancestors began to colonise dry land, evolving into numerous vertebrate species equipped with, among other things, lungs capable of absorbing oxygen, as well as feet and hands. Understanding how these limbs appeared remains one of the oldest and most debated scientific questions. Did they evolve from fins, the homologues of our arms and legs, or, conversely, are they entirely new structures?


Change of perspective

To answer this question, the research team did not just study the genes involved in the development of the digits themselves, but also explored the vast non-coding regions of the genome (the set of chromosomes and genes of a species or individual) that control their expression and activation. These regions are called “regulatory landscapes” and are much larger than the coding regions, which make up only 2% of the genome, they act as veritable “control towers” for gene expression.


By comparing the genomes of mice and fish, the researchers first identified a regulatory landscape conserved between the two species and involved in the development of mouse digits. Then, by removing this large region of DNA in fish using CRISPR/Cas9 technology – genetic scissors that enable genome editing – the team observed a loss of gene expression in the cloaca, but not in the fins.


This surprising result suggests that the cloaca – an organ where the intestinal, excretory, and reproductive systems meet at their extremities in many species – has been reused in terrestrial vertebrates to develop digits. “The common feature between the cloaca and the digits is that they represent terminal parts. Sometimes they are the end of tubes in the digestive system, sometimes the end of feet and hands, i.e. digits. Therefore, both mark the end of something,” says Aurélie Hintermann, a former doctoral student at UNIGE, now a postdoctoral fellow at the Stowers Institute (USA) and co-author of the study conducted as part of her PhD thesis.


Evolutionary recycling

In particular, the regulatory landscapes in question control the activation of Hox genes, known as “architect genes.” They establish the body’s organisational plan by determining the position and identity of segments or organs. They act at the top of a complex network of thousands of operational genes by controlling their expression. A mutation in these genes can therefore lead to profound anatomical changes, which certainly explains their decisive role in evolution.


“The fact that these genes are involved is a striking example of how evolution innovates, recycling the old to make the new,” comments Denis Duboule, honorary professor at UNIGE and the Collège de France and initiator of the study. “Rather than building a new regulatory system for the digits, nature has repurposed an existing mechanism, initially active in the cloaca.”


A new piece in the puzzle of evolution

It is therefore not only the operational or coding genes that evolve, but above all the architecture of their regulation. And sometimes, an entire region can be recycled in another morphological context, as is the case with the cloaca and digits. The question now is not where these changes appear in the genome, but how, in order to continue describing the mechanisms of evolution and explain the transition from a distant aquatic ancestor to today’s fish and humans.