Wednesday, April 16, 2025

 CSI

Researchers introduce a brand-new method to detect gunshot residue at the crime scene



Crime scene investigation may soon become significantly more accurate and efficient




Universiteit van Amsterdam

Photoluminescent lead detection in gunshot residue 

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Photoluminescent lead detection in gunshot residue. (A) Shooting firearms produces gunshot residue that typically contains lead particulates. (B) Methyl ammonium bromide in the reagent reacts with lead in gunshot residue to form perovskite, which emits bright green light upon illumination with UV light. (C) Typically, the combustion plume and bullet wipe contaminate objects such as clothing, hands, and targets with gunshot residue, which is rapidly visualized with photoluminescent lead detection to assess suspect involvement and to assist crime scene reconstruction. Image provided by AMOLF.

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Credit: AMOLF




Crime scene investigation may soon become significantly more accurate and efficient thanks to a new method for detecting gunshot residues. Researchers from the groups of Wim Noorduin (AMOLF / University of Amsterdam) and Arian van Asten (University of Amsterdam) developed the technique that converts lead particles found in gunshot residue into a light-emitting semiconductor. The method, published last month in 'Forensic Science International', is faster, more sensitive, and easier to use than current alternatives. Forensic experts at the Amsterdam police force are already testing it in actual crime scene investigations.

Gunshot Residue Clues
The innovative light-emitting lead analysis method offers exciting opportunities for crime scene investigations. When a weapon is fired, it leaves gunshot residue containing lead traces on the surrounding environment, including clothing and skin. Bente van Kralingen, a forensic expert at the Amsterdam Police, explains: "Obtaining an indication of gunshot residue at the crime scene is a major advantage, helping us answer key questions about shooting incidents. For instance, determining whether the damage found could have been caused by a bullet and determining the relative position of a person who might have been involved in a shooting incident. We test for lead traces on possible bullet holes and a suspect’s or a victim’s clothing or hands."

Currently, police send all samples to the lab for analysis. However, the methods used there are often time-consuming, labor-intensive, and require expensive equipment. "We’re excited about the tests we’re conducting, and hopefully this will allow us to use the light-emitting method soon in actual court cases as evidence," says Bente.

Semiconductor Technology
The new analysis method builds on recent advances in perovskite research. Perovskites are a promising material used in applications ranging from solar cells to LEDs. A few years ago, the research group of Wim Noorduin developed an easy-to-use lead detection method based on perovskite technology. In this method a reagent converts lead containing surfaces into a perovskite semiconductor. Shining with a UV lamp will make the newly formed semiconductor emit a bright green glow visible to the naked eye—making even small traces of lead easily detectable. 

In 2021, Wim Noorduin and Lukas Helmbrecht (formerly PhD student in the group) established a start-up company to develop this lead testing method into a practical lead detection kit: Lumetallix. Over the past years, many people worldwide have been investigating their surroundings using the Lumetallix test kit. They report positive tests in all sorts of objects, for example: dinner plates, beer glasses, but also in paint dust at construction sites. 

Lukas Helmbrecht developed an altered version of the Lumetallix reagent for the forensic application: one that reacts especially well with lead atoms in gunshot residue and produces a long-lasting green glow. 

At the shooting range
To validate the effectiveness of this method, the researchers conducted a series of controlled experiments. PhD students Kendra Adelberg and Arno van der Weijden (AMOLF/UvA) visited a shooting range in Amsterdam. Kendra: "We used standard 9 mm full metal jacket bullets and fired them from two different pistols at cotton cloth targets placed at various distances. After applying the reagent, we visualized the gunshot residue patterns. The results revealed well-defined luminescent patterns that were clearly visible to the naked eye, even at extended distances," says Kendra.

During their experiments, Kendra and her colleagues made two other remarkable discoveries. Firstly, unlike other methods, the new light-emitting technique remains effective even after extensive washing of the shooter’s hands. This is important for forensic investigations, as suspects often try to tamper with or remove evidence of their involvement. Secondly, bystanders standing approximately two meters away from the shooter also tested positive for lead traces on their hands. "These findings provide valuable pieces of the puzzle when reconstructing a shooting incident. But, a positive test also needs to be carefully interpreted, it does not automatically mean that you fired a gun." says Kendra.

Who Will Benefit?
The researchers believe this new method will be especially beneficial to first responders, such as police officers, who can use it to rapidly screen potential suspects and witnesses to secure crucial evidence.
Beyond forensic applications, the team is also exploring the potential of this light-emitting method to detect lead contamination in environmental samples such as water and soil. Since lead is toxic and harmful to the environment, this research could have broader implications for environmental monitoring and public health.

Reference 
Kendra Adelberg, Arno van der Weijden, Lukas Helmbrecht, Diede Blaauw, Arian C. van Asten, Willem L. Noorduin, Perovskite-based photoluminescent detection of lead particles in gunshot residue, Forensic Science International, 370, 112415, March 9th (2025). https://doi.org/10.1016/j.forsciint.2025.112415


(A) Color marked areas for gunshot residue testing. (B) Direct lead testing on shooter’s hand showing bright green luminescence. (C) Lead testing on the hand of bystander after shooting showing moderate luminescence, and (D) weak luminescence after washing with water and soap. (E) Bystander’s hand after thorough washing still showing clear green luminescence on nails. (F) Indirect lead testing by wiping glass fiber cloth over clothing of a bystander shows bright luminescence. (G) Indirect testing of bystander’s shoe sole. (H) SEM stub after stubbing shooter’s hand showing green luminescence where lead is present. Image provided by AMOLF.

Credit

AMOLF

The new method for detecting g [VIDEO] 

 

Our DNA is at risk of hacking - warn scientists



First comprehensive review of cyber-biosecurity risks released


University of Portsmouth




Next-generation DNA sequencing (NGS)  - the same technology which is powering the development of tailor-made medicines, cancer diagnostics, infectious disease tracking, and gene research - could become a prime target for hackers.

study, published in IEEE Access, highlights growing concerns over how this powerful sequencing tool - if left unsecured - could be exploited for data breaches, privacy violations, and even future biothreats.

Led by Dr Nasreen Anjum from the University of Portsmouth’s School of Computing, it is the first comprehensive research study of cyber-biosecurity threats across the entire NGS workflow.

NGS is a cornerstone of modern biotechnology, enabling rapid and cost-effective DNA and RNA sequencing that supports important advances in cancer research, drug development, agricultural innovation and forensic science.

The sequencing process within NGS workflow involves a series of complex, interdependent steps - from sample preparation and sequencing to data analysis and interpretation - each involving highly specialised instruments, technologies, software, and connected systems.

While the steps are essential for generating accurate results, they also open up multiple points of vulnerability. As many DNA datasets are openly accessible online, the study warns it is possible for cybercriminals to misuse the information for surveillance, manipulation, or malicious experimentation.

Dr Anjum said: "Our work is a wake-up call. Protecting genomic data isn’t just about encryption - it’s about anticipating attacks that don’t yet exist. We need a paradigm shift in how we secure the future of precision medicine."

The research was carried out in collaboration with colleagues from the Department of Computer Science at Anglia Ruskin University in Cambridge, the University of Gloucestershire’s Department of Cyber Security and ComputingNarjan University’s Department of Computer Science and Emerging Research Laboratory, and the Department of Microbiology at Shaheed Benazir Bhutto Women University.

Dr Mahreen-Ul-Hassan, microbiologist and co-author from the Shaheed Benazir Bhutto Women University, said: "Genomic data is one of the most personal forms of data we have. If compromised, the consequences go far beyond a typical data breach.”

The research team identified new and emerging methods that hackers and those with malicious intent could use to exploit or attack systems, such as synthetic DNA-encoded malware, AI-driven manipulation of genome data, and identity tracing through re-identification techniques. These threats go beyond typical data breaches, posing risks to individual privacy, scientific integrity, and national security.

Dr Anjun added: “Despite its importance, cyber-biosecurity remains one of the most neglected and poorly understood research disciplines and is leaving a critical gap in global biosecurity. To make sure our DNA information stays safe and is used only for good, we’re urging more research and collaboration to find ways to keep this powerful technology secure.

“Governments, regulatory bodies, funding agencies, and academic institutions must prioritise this field and invest in dedicated research, education, and policy development before it’s too late.

“Without coordinated action, genomic data could be exploited for surveillance, discrimination, or even bioterrorism. Current protections are fragmented, and vital collaboration between disciplines is lacking. Key to successful prevention will be interdisciplinary cooperation between computer scientists, bioinformaticians, biotechnologists, and security professionals - groups that rarely work together but must align.

“Our research lays the foundations for improving biosecurity by providing a single, clear list of all the possible threats in the entire next-generation sequencing process.”

The paper also recommends practical solutions, including secure sequencing protocols, encrypted storage, and AI-powered anomaly detection, creating a foundation for much stronger cyber-biosecurity.

The study was funded by the British Council’s UK-Saudi Challenge Fund and a Quality Related Research Grant from the University of Portsmouth. 

 

Climate-related trauma can have lasting effects on decision-making, study finds



Researchers found that wildfire survivors were less likely to stick with choices that offered greater long-term rewards.



University of California - San Diego





A new study from University of California San Diego suggests that climate trauma — such as experiencing a devastating wildfire — can have lasting effects on cognitive function. The research, which focused on survivors of the 2018 Camp Fire in Northern California, found that individuals directly exposed to the disaster had difficulty making decisions that prioritize long-term benefits. The findings were recently published in Scientific Reports, part of the Nature portfolio of journals.

“Our previous research has shown that survivors of California’s 2018 Camp Fire experience prolonged symptoms of post-traumatic stress disorder, anxiety and depression alongside hyper-distractibility,” said Jyoti Mishra, Ph.D., senior author and an associate professor at UC San Diego’s School of Medicine and co-director of the University of California Climate Resilience Initiative. “This new study suggests that climate trauma may also impact important cognitive abilities of decision-making and underlying brain function.”

Wildfires, which have become increasingly frequent due to climate change, are known to affect both physical and mental health. This study provides new evidence that cognitive function — particularly decision-making — is also impacted.

The study involved 75 participants, divided into three groups:

  • Directly exposed to the fire (n=27)
  • Indirectly exposed (witnessed the fire but were not directly affected, n=21)
  • Non-exposed controls (n=27)

All participants completed a decision-making task with monetary rewards while undergoing Electroencephalogram (EEG) brain recordings. Researchers evaluated their Win-Stay behavior, measuring how often they continued selecting the option with the highest long-term rewards.

Researchers found that wildfire survivors were significantly less likely to stick with choices that offered long-term rewards, a behavior they tracked with a choice metric known as “Win-Stay.” Brain recordings revealed a possible reason why. EEG brain scans taken while participants engaged in the decision-making tasks showed heightened activity in the parietal brain region, and localized to the posterior cingulate cortex (PCC) — a brain region associated with deep thought and rumination.

“It was clear that brains of study participants directly exposed to wildfires — as opposed to those not exposed — became significantly hyper-aroused when trying to make proper decision choices but they were still unable to execute the task well,” said Jason Nan, a UC San Diego bioengineering graduate student and study first author. “We interpret this to mean that their brain was attempting to focus on making sound decisions, but they were unable to.”

Understanding how climate trauma affects decision-making could lead to new diagnostic tools and personalized treatments for those impacted. One potential intervention is mindfulness and compassion training, which has shown promise in suppressing ruminating thoughts and thereby, mitigating the effects of trauma. Mobilizing early post-disaster intervention resources is a key priority of the California Climate Resilience Initiative.

As climate disasters become more frequent and more severe, researchers emphasize the need to: study pre- vs. post-disaster cognitive changes, investigate long-term effects of repeated exposure to climate trauma and develop scalable mental health interventions for affected communities.

Co-authors include: Satish Jaiswal and Dhakshin Ramanathan from UC San Diego, and Mathew C. Withers from Utah Valley University. 

The study was funded, in part, by the Tang Prize Foundation, the Hope for Depression Research Foundation and the CA CARES (Climate Action, Resilience, and Environmental Sustainability) proof of concept funds.

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Your cells can hear



Uncovering the relationship between life and sound




Kyoto University

Your cells can hear 

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The fundamental relationship between life and sound. 

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Credit: (KyotoU/Kumeta lab)





Kyoto, Japan -- There's a sensation that you experience -- near a plane taking off or a speaker bank at a concert -- from a sound so total that you feel it in your very being. When this happens, not only do your brain and ears perceive it, but your cells may also.

Technically speaking, sound is a simple phenomenon, consisting of compressional mechanical waves transmitted through substances, which exists universally in the non-equilibrated material world. Sound is also a vital source of environmental information for living beings, while its capacity to induce physiological responses at the cell level is only just beginning to be understood.

Following on previous work from 2018, a team of researchers at Kyoto University have been inspired by research in mechanobiology and body-conducted sound -- the sound environment in body tissues -- indicating that acoustic pressure transmitted by sound may be sufficient to induce cellular responses.

"To investigate the effect of sound on cellular activities, we designed a system to bathe cultured cells in acoustic waves," says corresponding author Masahiro Kumeta.

The team first attached a vibration transducer upside-down on a shelf. Then using a digital audio player connected to an amplifier, they sent sound signals through the transducer to a diaphragm attached to a cell culture dish. This allowed the researchers to emit acoustic pressure within the range of physiological sound to cultured cells.

Following this experiment, the researchers analyzed the effect of sound on cells using RNA-sequencing, microscopy, and other methods. Their results revealed cell-level responses to the audible range of acoustic stimulation.

In particular, the team noticed the significant effect of sound in suppressing adipocyte differentiation, the process by which preadipocytes transform into fat cells, unveiling the possibility of utilizing acoustics to control cell and tissue states.

"Since sound is non-material, acoustic stimulation is a tool that is non-invasive, safe, and immediate, and will likely benefit medicine and healthcare," says Kumeta.

The research team also identified about 190 sound-sensitive genes, noted the effect of sound in controlling cell adhesion activity, and observed the subcellular mechanism through which sound signals are transmitted.

In addition to providing compelling evidence of the perception of sound at the cell level, this study also challenges the traditional concept of sound perception by living beings, which is that it is mediated by receptive organs like the brain. It turns out that your cells respond to sounds, too.

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The paper "Acoustic modulation of mechanosensitive genes and adipocyte differentiation" appeared on 16 April 2025 in Communications Biology, with doi: 10.1038/s42003-025-07969-1

About Kyoto University

Kyoto University is one of Japan and Asia's premier research institutions, founded in 1897 and responsible for producing numerous Nobel laureates and winners of other prestigious international prizes. A broad curriculum across the arts and sciences at undergraduate and graduate levels complements several research centers, facilities, and offices around Japan and the world. For more information, please see: http://www.kyoto-u.ac.jp/en

1812 OVETURE CLIMAX WITH CANNONS


 

HKU civil engineering team develops innovative solution for tracking antibiotic resistance genes



The University of Hong Kong
Argo 

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Argo overview

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Credit: The University of Hong Kong





The global proliferation of antibiotic resistance genes (ARGs) poses a significant threat to the efficacy of antibiotic-based treatments for diseases. Effective monitoring of ARGs across both spatial and temporal dimensions is essential to understanding their transmission and implementing preventive measures.

A research team led by Professor Tong Zhang from the Department of Civil Engineering of Faculty of Engineering at the University of Hong Kong (HKU) has developed a computational tool, Argo, designed to accurately track ARGs in environmental samples, providing insights into their dissemination and associated risks.

“Short-read sequencing method is currently used as a high-throughput DNA sequencing technique that generates large volumes of short DNA fragments, typically 150 base pairs. However, it often fails to provide information on the hosts of ARGs," explained Professor Zhang. “Without detailed host information, it becomes challenging to accurately assessing the risks of ARGs and tracing their transmission, hindering our understanding of their impact on human health and the environment.”

Argo utilises long-read sequencing, a method that can generate DNA fragments significantly longer than 150 base pairs, to rapidly identify and quantify ARGs in environmental metagenomes. By assigning taxonomic labels to read clusters (collections of reads that overlap to each other), Argo significantly enhances ARGs detection resolution. The key difference between Argo and existing tools lies in its method of grouping and analysing DNA fragments based on their overlaps, assigning labels to these groups rather than individual reads. Argo has a distinct advantage in host identification accuracy, providing a more comprehensive ARG profile.

Professor Zhang elaborated, “It is like solving a puzzle. Initially, we group DNA fragment pieces based on shared features like colour, making it easier to identify and label the locations of overlapping or similar pieces in groups. Our research showcased that Argo's read-overlapping approach achieved the lowest misclassification rate in comparison to other tools through simulations. For a 10 Gbp (10^10 base pairs) metagenomic sample, Argo typically completes analysis within 20 minutes using 32 CPU threads.”

While long-read sequencing remains costly for achieving high throughput, the team considers the new method vital in addressing the growing threat posed by ARGs. Professor Zhang concluded, "Argo has the potential to standardise ARGs surveillance and enhance our ability to trace the origins and dissemination pathways of ARGs, contributing to efforts to tackle the global health threat of antimicrobial resistance (AMR).”

The research paper, “Species-resolved profiling of antibiotic resistance genes in complex metagenomes through long-read overlapping with Argo,” was published in Nature Communicationshttps://www.nature.com/articles/s41467-025-57088-y.

About Professor Tong Zhang
Professor Tong Zhang leads the Environmental Microbiome Engineering and Biotechnology Laboratory at the Department of Civil Engineering of Faculty of Engineering at HKU. His research focuses on the “environmental microbiome.” He has conducted pioneering work on the emerging topic of the “Environmental Dimension of Antibiotic Resistance” in the microbiome field.

Currently, Professor Zhang is leading an interdisciplinary team of professors from various universities to conduct a Theme-based Research project "Assess Antibiotic Resistome Flows from Pollution Hotspots to Environments and Explore the Control Strategies (T21-705/20-N)". More information about Professor Zhang and the research team can be found at https://smile.hku.hk/.

About the Research Team
The first author, Mr Xi Chen, is a third-year PhD candidate under the supervision of Professor Zhang. Other scientists contributing to the research include Dr Xiaole Yin, a former postdoctoral researcher in Professor Zhang’s research group, and Dr Xiaoqing Xu, a postdoctoral researcher in the same group.